Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HINT3Q9NQE9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HINT3Q9NQE9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HINT3Q9NQE9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.6■□□□□ 0.57
HINT3Q9NQE9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HINT3Q9NQE9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.6■□□□□ 0.57
HINT3Q9NQE9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.6■□□□□ 0.57
HINT3Q9NQE9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.6■□□□□ 0.57
HINT3Q9NQE9 AL354811.1-201ENST00000610286 706 ntBASIC18.6■□□□□ 0.57
HINT3Q9NQE9 AL512408.1-201ENST00000569378 2000 ntBASIC18.6■□□□□ 0.57
HINT3Q9NQE9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HINT3Q9NQE9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HINT3Q9NQE9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
HINT3Q9NQE9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HINT3Q9NQE9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.6■□□□□ 0.57
HINT3Q9NQE9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 AC012414.1-201ENST00000556676 535 ntBASIC18.59■□□□□ 0.57
HINT3Q9NQE9 RARRES2P6-201ENST00000567333 442 ntBASIC18.59■□□□□ 0.57
HINT3Q9NQE9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 AL162377.1-201ENST00000618844 1793 ntBASIC18.59■□□□□ 0.57
HINT3Q9NQE9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HINT3Q9NQE9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.58■□□□□ 0.57
HINT3Q9NQE9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
HINT3Q9NQE9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HINT3Q9NQE9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HINT3Q9NQE9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HINT3Q9NQE9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HINT3Q9NQE9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HINT3Q9NQE9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HINT3Q9NQE9 AC112907.3-201ENST00000577781 2400 ntBASIC18.58■□□□□ 0.57
HINT3Q9NQE9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HINT3Q9NQE9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HINT3Q9NQE9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HINT3Q9NQE9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.58■□□□□ 0.56
HINT3Q9NQE9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HINT3Q9NQE9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HINT3Q9NQE9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HINT3Q9NQE9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HINT3Q9NQE9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.58■□□□□ 0.56
HINT3Q9NQE9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.58■□□□□ 0.56
HINT3Q9NQE9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HINT3Q9NQE9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 AC007952.6-201ENST00000573168 2673 ntBASIC18.56■□□□□ 0.56
HINT3Q9NQE9 AC003957.1-201ENST00000625108 2673 ntBASIC18.56■□□□□ 0.56
HINT3Q9NQE9 AC011484.1-201ENST00000377652 1995 ntBASIC18.56■□□□□ 0.56
HINT3Q9NQE9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms