Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.15■■□□□ 1.14
CDH23Q9H251 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CDH23Q9H251 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.14■■□□□ 1.14
CDH23Q9H251 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
CDH23Q9H251 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.14■■□□□ 1.14
CDH23Q9H251 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.14■■□□□ 1.14
CDH23Q9H251 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.14■■□□□ 1.14
CDH23Q9H251 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDH23Q9H251 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
CDH23Q9H251 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDH23Q9H251 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDH23Q9H251 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.14■■□□□ 1.13
CDH23Q9H251 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.14■■□□□ 1.13
CDH23Q9H251 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CDH23Q9H251 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CDH23Q9H251 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.14■■□□□ 1.13
CDH23Q9H251 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.13■■□□□ 1.13
CDH23Q9H251 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.13■■□□□ 1.13
CDH23Q9H251 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.13■■□□□ 1.13
CDH23Q9H251 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDH23Q9H251 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDH23Q9H251 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDH23Q9H251 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.13■■□□□ 1.13
CDH23Q9H251 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CDH23Q9H251 REXO1L10P-201ENST00000615707 1290 ntBASIC22.13■■□□□ 1.13
CDH23Q9H251 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CDH23Q9H251 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CDH23Q9H251 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.13■■□□□ 1.13
CDH23Q9H251 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
CDH23Q9H251 CYP2D8P-201ENST00000433633 1490 ntBASIC22.13■■□□□ 1.13
CDH23Q9H251 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.13■■□□□ 1.13
CDH23Q9H251 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.13■■□□□ 1.13
CDH23Q9H251 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDH23Q9H251 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDH23Q9H251 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC22.12■■□□□ 1.13
CDH23Q9H251 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.12■■□□□ 1.13
CDH23Q9H251 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.12■■□□□ 1.13
CDH23Q9H251 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDH23Q9H251 UPK3BP1-201ENST00000428678 509 ntBASIC22.12■■□□□ 1.13
CDH23Q9H251 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDH23Q9H251 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDH23Q9H251 AC079089.2-201ENST00000531211 1277 ntBASIC22.12■■□□□ 1.13
CDH23Q9H251 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.12■■□□□ 1.13
CDH23Q9H251 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC22.12■■□□□ 1.13
CDH23Q9H251 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDH23Q9H251 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CDH23Q9H251 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDH23Q9H251 AC091799.1-201ENST00000422823 811 ntBASIC22.11■■□□□ 1.13
CDH23Q9H251 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDH23Q9H251 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CDH23Q9H251 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.11■■□□□ 1.13
CDH23Q9H251 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDH23Q9H251 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CDH23Q9H251 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.1■■□□□ 1.13
CDH23Q9H251 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
CDH23Q9H251 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDH23Q9H251 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDH23Q9H251 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.1■■□□□ 1.13
CDH23Q9H251 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDH23Q9H251 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDH23Q9H251 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CDH23Q9H251 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.1■■□□□ 1.13
CDH23Q9H251 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.1■■□□□ 1.13
CDH23Q9H251 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.1■■□□□ 1.13
CDH23Q9H251 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.1■■□□□ 1.13
CDH23Q9H251 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDH23Q9H251 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDH23Q9H251 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDH23Q9H251 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.1■■□□□ 1.13
CDH23Q9H251 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.1■■□□□ 1.13
CDH23Q9H251 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDH23Q9H251 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDH23Q9H251 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH23Q9H251 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.09■■□□□ 1.13
CDH23Q9H251 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH23Q9H251 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.09■■□□□ 1.13
CDH23Q9H251 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.09■■□□□ 1.13
CDH23Q9H251 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH23Q9H251 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH23Q9H251 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH23Q9H251 MMP23A-201ENST00000234610 1017 ntBASIC22.09■■□□□ 1.13
CDH23Q9H251 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH23Q9H251 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH23Q9H251 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.09■■□□□ 1.13
CDH23Q9H251 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH23Q9H251 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDH23Q9H251 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.09■■□□□ 1.13
CDH23Q9H251 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.09■■□□□ 1.13
CDH23Q9H251 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH23Q9H251 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.09■■□□□ 1.13
CDH23Q9H251 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDH23Q9H251 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.08■■□□□ 1.13
CDH23Q9H251 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDH23Q9H251 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
CDH23Q9H251 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDH23Q9H251 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDH23Q9H251 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CDH23Q9H251 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDH23Q9H251 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDH23Q9H251 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms