Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 NIFKP1-201ENST00000398317 889 ntBASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 VN1R51P-201ENST00000411675 945 ntBASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 MTCYBP5-201ENST00000423752 1135 ntBASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 AL390879.2-203ENST00000426943 1121 ntBASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 UBE2V1P7-201ENST00000446395 340 ntBASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 EMP1-206ENST00000537612 505 ntTSL 3 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 AC011939.1-201ENST00000567680 964 ntBASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 AC010245.2-201ENST00000606908 1167 ntBASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 AP001505.2-201ENST00000616815 443 ntBASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 AL121890.3-201ENST00000618494 516 ntBASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 TAC1-201ENST00000319273 1239 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 RNU5E-4P-201ENST00000364931 120 ntBASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 SLC9B1P2-201ENST00000398120 1184 ntBASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 MTCO3P43-201ENST00000440974 771 ntBASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 AC108734.3-201ENST00000481241 1165 ntBASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 CASC9-201ENST00000504531 1164 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 OR8K2P-201ENST00000524645 927 ntBASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 UBXN8-207ENST00000615729 702 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 AC116165.2-201ENST00000616705 206 ntBASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 AL008636.1-201ENST00000625038 1018 ntBASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 AL450332.1-203ENST00000638742 1268 ntTSL 5 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 AC005692.1-201ENST00000461145 1439 ntTSL 5 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-3Q9BYR6 AP004833.2-201ENST00000532228 1454 ntBASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AC005832.2-201ENST00000538921 1430 ntBASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 OR5T3-201ENST00000303059 1023 ntBASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 Y_RNA.436-201ENST00000384097 102 ntBASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AC233289.1-201ENST00000403700 508 ntBASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 VDAC1P13-201ENST00000447826 859 ntBASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AP000563.1-201ENST00000490865 758 ntBASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 BAALC-AS1-202ENST00000500902 993 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 OSBPL9P5-201ENST00000542581 171 ntBASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 PRSS58-202ENST00000552471 1123 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AC140658.4-201ENST00000561990 352 ntBASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 AC138627.1-204ENST00000641894 765 ntBASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms