RNA–Protein interactions for RNA: ENST00000537222.6

PDZD9-203, Transcript of PDZ domain containing 9, humanhuman

TSL 3 BASIC

Gene PDZD9, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD9-203ENST00000537222 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
PDZD9-203ENST00000537222 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
PDZD9-203ENST00000537222 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
PDZD9-203ENST00000537222 PHF23Q9BUL5 403 aaPredicted RBP23.99■■□□□ 1.43
PDZD9-203ENST00000537222 FOXD1Q16676 465 aa22.74■■□□□ 1.23
PDZD9-203ENST00000537222 PLPPR3Q6T4P5 718 aa21.4■■□□□ 1.02
PDZD9-203ENST00000537222 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
PDZD9-203ENST00000537222 MSH5O43196 834 aa21.19■□□□□ 0.98
PDZD9-203ENST00000537222 PIAS4Q8N2W9 510 aaPredicted RBP21.13■□□□□ 0.97
PDZD9-203ENST00000537222 ADRA2BP18089 450 aa21.09■□□□□ 0.97
PDZD9-203ENST00000537222 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
PDZD9-203ENST00000537222 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
PDZD9-203ENST00000537222 DMRT2Q9Y5R5 561 aa19.26■□□□□ 0.67
PDZD9-203ENST00000537222 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
PDZD9-203ENST00000537222 PPP4R3CPQ6ZMV5 832 aa18.79■□□□□ 0.6
PDZD9-203ENST00000537222 HOXD11P31277 338 aaPredicted RBP18.53■□□□□ 0.56
PDZD9-203ENST00000537222 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
PDZD9-203ENST00000537222 DCAF8L1A6NGE4 600 aa18.39■□□□□ 0.53
PDZD9-203ENST00000537222 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
PDZD9-203ENST00000537222 CACNB1Q02641 598 aaPredicted RBP18.27■□□□□ 0.52
PDZD9-203ENST00000537222 RNF39Q9H2S5 420 aa18.16■□□□□ 0.5
PDZD9-203ENST00000537222 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
PDZD9-203ENST00000537222 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
PDZD9-203ENST00000537222 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
PDZD9-203ENST00000537222 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
PDZD9-203ENST00000537222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
PDZD9-203ENST00000537222 KCNA4P22459 653 aa17.36■□□□□ 0.37
PDZD9-203ENST00000537222 U3KPZ7 1027 aaPredicted RBP17.29■□□□□ 0.36
PDZD9-203ENST00000537222 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
PDZD9-203ENST00000537222 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
PDZD9-203ENST00000537222 DSG3P32926 999 aa16.97■□□□□ 0.31
PDZD9-203ENST00000537222 CAPN15O75808 1086 aa16.95■□□□□ 0.3
PDZD9-203ENST00000537222 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
PDZD9-203ENST00000537222 ABCB7O75027 752 aa16.61■□□□□ 0.25
PDZD9-203ENST00000537222 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
PDZD9-203ENST00000537222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
PDZD9-203ENST00000537222 APLP2Q06481 763 aa16.56■□□□□ 0.24
PDZD9-203ENST00000537222 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
PDZD9-203ENST00000537222 SAMD1Q6SPF0 538 aaPredicted RBP16.5■□□□□ 0.23
PDZD9-203ENST00000537222 POTEHQ6S545 545 aa16.41■□□□□ 0.22
PDZD9-203ENST00000537222 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
PDZD9-203ENST00000537222 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.2
PDZD9-203ENST00000537222 POLA2Q14181 598 aa16.21■□□□□ 0.19
PDZD9-203ENST00000537222 ATF5Q9Y2D1 282 aaPredicted RBP16.17■□□□□ 0.18
PDZD9-203ENST00000537222 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
PDZD9-203ENST00000537222 RBM42Q9BTD8 480 aaKnown RBP16.05■□□□□ 0.16
PDZD9-203ENST00000537222 ZBTB22O15209 634 aa16.02■□□□□ 0.16
PDZD9-203ENST00000537222 CHRDL2Q6WN34 429 aa15.83■□□□□ 0.12
PDZD9-203ENST00000537222 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
PDZD9-203ENST00000537222 ZBTB12Q9Y330 459 aaPredicted RBP15.75■□□□□ 0.11
PDZD9-203ENST00000537222 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
PDZD9-203ENST00000537222 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
PDZD9-203ENST00000537222 ATXN8OSP0DMR3 200 aa15.65■□□□□ 0.1
PDZD9-203ENST00000537222 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
PDZD9-203ENST00000537222 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
PDZD9-203ENST00000537222 PIP4P2Q8N4L2 257 aa15.48■□□□□ 0.07
PDZD9-203ENST00000537222 PITPNM1O00562 1244 aa15.47■□□□□ 0.07
PDZD9-203ENST00000537222 MKRN4PQ13434 485 aaPredicted RBP15.4■□□□□ 0.06
PDZD9-203ENST00000537222 FXR2P51116 673 aaKnown RBP eCLIP15.37■□□□□ 0.05
PDZD9-203ENST00000537222 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
PDZD9-203ENST00000537222 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
PDZD9-203ENST00000537222 FBLN2P98095 1184 aa15.32■□□□□ 0.04
PDZD9-203ENST00000537222 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
PDZD9-203ENST00000537222 SP7Q8TDD2 431 aaPredicted RBP15.31■□□□□ 0.04
PDZD9-203ENST00000537222 SSUH2Q9Y2M2 353 aa15.18■□□□□ 0.02
PDZD9-203ENST00000537222 HAX1O00165 279 aa15.15■□□□□ 0.02
PDZD9-203ENST00000537222 EVX2Q03828 476 aa15.13■□□□□ 0.01
PDZD9-203ENST00000537222 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
PDZD9-203ENST00000537222 SPDYE1Q8NFV5 336 aaPredicted RBP15.07■□□□□ 0
PDZD9-203ENST00000537222 CLEC11AQ9Y240 323 aa15.07■□□□□ 0
PDZD9-203ENST00000537222 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
PDZD9-203ENST00000537222 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
PDZD9-203ENST00000537222 CHADLQ6NUI6 762 aa14.9□□□□□ -0.02
PDZD9-203ENST00000537222 C19orf67A6NJJ6 358 aa14.88□□□□□ -0.03
PDZD9-203ENST00000537222 PRR29P0C7W0 189 aa14.79□□□□□ -0.04
PDZD9-203ENST00000537222 GABBR2O75899 941 aa14.69□□□□□ -0.06
PDZD9-203ENST00000537222 FARP1Q9Y4F1 1045 aaPredicted RBP14.6□□□□□ -0.07
PDZD9-203ENST00000537222 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
PDZD9-203ENST00000537222 CREBZFQ9NS37 354 aa14.5□□□□□ -0.09
PDZD9-203ENST00000537222 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
PDZD9-203ENST00000537222 POTEIP0CG38 1075 aa14.47□□□□□ -0.09
PDZD9-203ENST00000537222 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
PDZD9-203ENST00000537222 LHX8Q68G74 356 aa14.36□□□□□ -0.11
PDZD9-203ENST00000537222 ZNF579Q8NAF0 562 aaKnown RBP14.32□□□□□ -0.12
PDZD9-203ENST00000537222 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
PDZD9-203ENST00000537222 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
PDZD9-203ENST00000537222 CLCN6P51797 869 aa14.27□□□□□ -0.13
PDZD9-203ENST00000537222 GALR2O43603 387 aaPredicted RBP14.21□□□□□ -0.13
PDZD9-203ENST00000537222 PROM2Q8N271 834 aa14.21□□□□□ -0.13
PDZD9-203ENST00000537222 DCBLD2Q96PD2 775 aa14.15□□□□□ -0.14
PDZD9-203ENST00000537222 PHF12Q96QT6 1004 aa14.15□□□□□ -0.14
PDZD9-203ENST00000537222 NPM1P06748 294 aaKnown RBP eCLIP14.08□□□□□ -0.16
PDZD9-203ENST00000537222 PAK3O75914 559 aaPredicted RBP14.04□□□□□ -0.16
PDZD9-203ENST00000537222 FKBP8Q14318 412 aa14.02□□□□□ -0.17
PDZD9-203ENST00000537222 POTEB2H3BUK9 544 aa13.99□□□□□ -0.17
PDZD9-203ENST00000537222 PELP1Q8IZL8 1130 aaKnown RBP13.99□□□□□ -0.17
PDZD9-203ENST00000537222 MS4A3Q96HJ5 214 aa13.96□□□□□ -0.17
PDZD9-203ENST00000537222 OTUD5Q96G74 571 aa13.9□□□□□ -0.18
PDZD9-203ENST00000537222 TSPYL2Q9H2G4 693 aaPredicted RBP13.9□□□□□ -0.18
PDZD9-203ENST00000537222 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms