RNA–Protein interactions for RNA: ENST00000426943.4

AL390879.2-203, humanhuman

BASIC

Gene AL390879.2, Length 1,121 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390879.2-203ENST00000426943 AEBP2Q6ZN18 517 aaPredicted RBP29.12■■■□□ 2.25
AL390879.2-203ENST00000426943 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
AL390879.2-203ENST00000426943 PHF23Q9BUL5 403 aaPredicted RBP25.17■■□□□ 1.62
AL390879.2-203ENST00000426943 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
AL390879.2-203ENST00000426943 PLPPR3Q6T4P5 718 aa23.4■■□□□ 1.34
AL390879.2-203ENST00000426943 FOXD1Q16676 465 aa22.92■■□□□ 1.26
AL390879.2-203ENST00000426943 ADRA2BP18089 450 aa22.19■■□□□ 1.14
AL390879.2-203ENST00000426943 PPP6R1Q9UPN7 881 aa22.16■■□□□ 1.14
AL390879.2-203ENST00000426943 PIAS4Q8N2W9 510 aaPredicted RBP21.72■■□□□ 1.07
AL390879.2-203ENST00000426943 MSH5O43196 834 aa21.14■□□□□ 0.97
AL390879.2-203ENST00000426943 PPP4R3CPQ6ZMV5 832 aa20.62■□□□□ 0.89
AL390879.2-203ENST00000426943 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
AL390879.2-203ENST00000426943 KCNA4P22459 653 aa20.3■□□□□ 0.84
AL390879.2-203ENST00000426943 NCBP3Q53F19 620 aaKnown RBP20.2■□□□□ 0.82
AL390879.2-203ENST00000426943 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
AL390879.2-203ENST00000426943 CNKSR2Q8WXI2 1034 aa20.02■□□□□ 0.8
AL390879.2-203ENST00000426943 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
AL390879.2-203ENST00000426943 DMRT2Q9Y5R5 561 aa19.76■□□□□ 0.75
AL390879.2-203ENST00000426943 RNF216Q9NWF9 866 aaPredicted RBP19.57■□□□□ 0.72
AL390879.2-203ENST00000426943 HOXD11P31277 338 aaPredicted RBP19.42■□□□□ 0.7
AL390879.2-203ENST00000426943 SLC4A1APQ9BWU0 796 aaKnown RBP19.42■□□□□ 0.7
AL390879.2-203ENST00000426943 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
AL390879.2-203ENST00000426943 EHMT2Q96KQ7 1210 aa19.07■□□□□ 0.64
AL390879.2-203ENST00000426943 DCAF8L1A6NGE4 600 aa19.02■□□□□ 0.64
AL390879.2-203ENST00000426943 POTEDQ86YR6 584 aa18.9■□□□□ 0.62
AL390879.2-203ENST00000426943 CSRNP3Q8WYN3 585 aa18.69■□□□□ 0.58
AL390879.2-203ENST00000426943 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
AL390879.2-203ENST00000426943 ZBTB22O15209 634 aa18.63■□□□□ 0.57
AL390879.2-203ENST00000426943 SLC4A2P04920 1241 aa18.62■□□□□ 0.57
AL390879.2-203ENST00000426943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.6■□□□□ 0.57
AL390879.2-203ENST00000426943 MYCNP04198 464 aaPredicted RBP18.34■□□□□ 0.53
AL390879.2-203ENST00000426943 U3KPZ7 1027 aaPredicted RBP18.22■□□□□ 0.51
AL390879.2-203ENST00000426943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
AL390879.2-203ENST00000426943 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
AL390879.2-203ENST00000426943 RNF39Q9H2S5 420 aa18.08■□□□□ 0.48
AL390879.2-203ENST00000426943 SAMD1Q6SPF0 538 aaPredicted RBP18.07■□□□□ 0.48
AL390879.2-203ENST00000426943 ATXN8OSP0DMR3 200 aa18.01■□□□□ 0.47
AL390879.2-203ENST00000426943 APLP2Q06481 763 aa17.96■□□□□ 0.47
AL390879.2-203ENST00000426943 C1QBPQ07021 282 aaKnown RBP17.91■□□□□ 0.46
AL390879.2-203ENST00000426943 ATF5Q9Y2D1 282 aaPredicted RBP17.77■□□□□ 0.44
AL390879.2-203ENST00000426943 CAPN15O75808 1086 aa17.68■□□□□ 0.42
AL390879.2-203ENST00000426943 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
AL390879.2-203ENST00000426943 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
AL390879.2-203ENST00000426943 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
AL390879.2-203ENST00000426943 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
AL390879.2-203ENST00000426943 POLA2Q14181 598 aa17.36■□□□□ 0.37
AL390879.2-203ENST00000426943 ABCB7O75027 752 aa17.33■□□□□ 0.36
AL390879.2-203ENST00000426943 DSG3P32926 999 aa17.26■□□□□ 0.35
AL390879.2-203ENST00000426943 FBLN2P98095 1184 aa17.13■□□□□ 0.33
AL390879.2-203ENST00000426943 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
AL390879.2-203ENST00000426943 MKRN4PQ13434 485 aaPredicted RBP16.99■□□□□ 0.31
AL390879.2-203ENST00000426943 FKBP8Q14318 412 aa16.96■□□□□ 0.31
AL390879.2-203ENST00000426943 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
AL390879.2-203ENST00000426943 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
AL390879.2-203ENST00000426943 SPDYE2BA6NHP3 402 aa16.63■□□□□ 0.25
AL390879.2-203ENST00000426943 SPDYE6P0CI01 402 aa16.63■□□□□ 0.25
AL390879.2-203ENST00000426943 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
AL390879.2-203ENST00000426943 ZNF692Q9BU19 519 aaPredicted RBP16.63■□□□□ 0.25
AL390879.2-203ENST00000426943 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
AL390879.2-203ENST00000426943 SSUH2Q9Y2M2 353 aa16.47■□□□□ 0.23
AL390879.2-203ENST00000426943 PROM2Q8N271 834 aa16.43■□□□□ 0.22
AL390879.2-203ENST00000426943 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
AL390879.2-203ENST00000426943 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
AL390879.2-203ENST00000426943 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
AL390879.2-203ENST00000426943 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
AL390879.2-203ENST00000426943 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
AL390879.2-203ENST00000426943 SPDYE1Q8NFV5 336 aaPredicted RBP16.12■□□□□ 0.17
AL390879.2-203ENST00000426943 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.16
AL390879.2-203ENST00000426943 VASPP50552 380 aaPredicted RBP16.07■□□□□ 0.16
AL390879.2-203ENST00000426943 PITPNM1O00562 1244 aa15.95■□□□□ 0.14
AL390879.2-203ENST00000426943 PRR29P0C7W0 189 aa15.95■□□□□ 0.14
AL390879.2-203ENST00000426943 PLCD3Q8N3E9 789 aa15.95■□□□□ 0.14
AL390879.2-203ENST00000426943 MIER1Q8N108 512 aa15.94■□□□□ 0.14
AL390879.2-203ENST00000426943 PLEKHG5O94827 1062 aa15.92■□□□□ 0.14
AL390879.2-203ENST00000426943 KLHL34Q8N239 644 aa15.84■□□□□ 0.13
AL390879.2-203ENST00000426943 IFNLR1Q8IU57 520 aaPredicted RBP15.83■□□□□ 0.12
AL390879.2-203ENST00000426943 AMER1Q5JTC6 1135 aaPredicted RBP15.77■□□□□ 0.12
AL390879.2-203ENST00000426943 ZBTB47Q9UFB7 747 aaPredicted RBP15.77■□□□□ 0.12
AL390879.2-203ENST00000426943 CHRDL2Q6WN34 429 aa15.73■□□□□ 0.11
AL390879.2-203ENST00000426943 CREBZFQ9NS37 354 aa15.7■□□□□ 0.1
AL390879.2-203ENST00000426943 SPOCK2Q92563 424 aa15.68■□□□□ 0.1
AL390879.2-203ENST00000426943 RTN4Q9NQC3 1192 aaKnown RBP15.66■□□□□ 0.1
AL390879.2-203ENST00000426943 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
AL390879.2-203ENST00000426943 FXR2P51116 673 aaKnown RBP eCLIP15.6■□□□□ 0.09
AL390879.2-203ENST00000426943 PRKAR2AP13861 404 aaKnown RBP15.59■□□□□ 0.09
AL390879.2-203ENST00000426943 PIP4P2Q8N4L2 257 aa15.55■□□□□ 0.08
AL390879.2-203ENST00000426943 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
AL390879.2-203ENST00000426943 MNX1P50219 401 aaPredicted RBP15.52■□□□□ 0.08
AL390879.2-203ENST00000426943 FARP1Q9Y4F1 1045 aaPredicted RBP15.48■□□□□ 0.07
AL390879.2-203ENST00000426943 CIZ1Q9ULV3 898 aaPredicted RBP15.44■□□□□ 0.06
AL390879.2-203ENST00000426943 NUBP1P53384 320 aa15.42■□□□□ 0.06
AL390879.2-203ENST00000426943 DCAF8Q5TAQ9 597 aa15.39■□□□□ 0.05
AL390879.2-203ENST00000426943 GSE1Q14687 1217 aa15.38■□□□□ 0.05
AL390879.2-203ENST00000426943 FAM212AQ96EL1 285 aa15.38■□□□□ 0.05
AL390879.2-203ENST00000426943 PKD2Q13563 968 aa15.35■□□□□ 0.05
AL390879.2-203ENST00000426943 RASEFQ8IZ41 740 aa15.33■□□□□ 0.04
AL390879.2-203ENST00000426943 ECM2O94769 699 aaPredicted RBP15.32■□□□□ 0.04
AL390879.2-203ENST00000426943 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
AL390879.2-203ENST00000426943 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
AL390879.2-203ENST00000426943 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms