Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CITED4Q96RK1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CITED4Q96RK1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CITED4Q96RK1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CITED4Q96RK1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CITED4Q96RK1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CITED4Q96RK1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CITED4Q96RK1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.57■□□□□ 0.4
CITED4Q96RK1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.57■□□□□ 0.4
CITED4Q96RK1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.57■□□□□ 0.4
CITED4Q96RK1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CITED4Q96RK1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CITED4Q96RK1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.57■□□□□ 0.4
CITED4Q96RK1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.57■□□□□ 0.4
CITED4Q96RK1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.57■□□□□ 0.4
CITED4Q96RK1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 AC073314.1-201ENST00000568729 2216 ntBASIC17.56■□□□□ 0.4
CITED4Q96RK1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.56■□□□□ 0.4
CITED4Q96RK1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CITED4Q96RK1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CITED4Q96RK1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CITED4Q96RK1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.56■□□□□ 0.4
CITED4Q96RK1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CITED4Q96RK1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.56■□□□□ 0.4
CITED4Q96RK1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CITED4Q96RK1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CITED4Q96RK1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CITED4Q96RK1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CITED4Q96RK1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CITED4Q96RK1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CITED4Q96RK1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CITED4Q96RK1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.55■□□□□ 0.4
CITED4Q96RK1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.55■□□□□ 0.4
CITED4Q96RK1 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.55■□□□□ 0.4
CITED4Q96RK1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CITED4Q96RK1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CITED4Q96RK1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CITED4Q96RK1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CITED4Q96RK1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CITED4Q96RK1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.55■□□□□ 0.4
CITED4Q96RK1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CITED4Q96RK1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CITED4Q96RK1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CITED4Q96RK1 AC112907.3-201ENST00000577781 2400 ntBASIC17.55■□□□□ 0.4
CITED4Q96RK1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CITED4Q96RK1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CITED4Q96RK1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CITED4Q96RK1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.54■□□□□ 0.4
CITED4Q96RK1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CITED4Q96RK1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CITED4Q96RK1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CITED4Q96RK1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CITED4Q96RK1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CITED4Q96RK1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.54■□□□□ 0.4
CITED4Q96RK1 KRT125P-201ENST00000546827 989 ntBASIC17.54■□□□□ 0.4
CITED4Q96RK1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.54■□□□□ 0.4
CITED4Q96RK1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CITED4Q96RK1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CITED4Q96RK1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CITED4Q96RK1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CITED4Q96RK1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CITED4Q96RK1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CITED4Q96RK1 AL133373.2-201ENST00000623187 2828 ntBASIC17.54■□□□□ 0.4
CITED4Q96RK1 AIRN-201ENST00000601203 4374 ntBASIC17.54■□□□□ 0.4
CITED4Q96RK1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CITED4Q96RK1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
CITED4Q96RK1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CITED4Q96RK1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
CITED4Q96RK1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.53■□□□□ 0.4
CITED4Q96RK1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CITED4Q96RK1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CITED4Q96RK1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CITED4Q96RK1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.53■□□□□ 0.4
CITED4Q96RK1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.53■□□□□ 0.4
CITED4Q96RK1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CITED4Q96RK1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CITED4Q96RK1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CITED4Q96RK1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CITED4Q96RK1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CITED4Q96RK1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.53■□□□□ 0.4
CITED4Q96RK1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CITED4Q96RK1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CITED4Q96RK1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.53■□□□□ 0.4
CITED4Q96RK1 AC022616.5-201ENST00000518796 181 ntBASIC17.53■□□□□ 0.4
CITED4Q96RK1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CITED4Q96RK1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CITED4Q96RK1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms