Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 AC005332.7-201ENST00000614046 2005 ntBASIC19.41■□□□□ 0.7
NR1H4Q96RI1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H4Q96RI1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
NR1H4Q96RI1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.39■□□□□ 0.7
NR1H4Q96RI1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 AC125437.2-201ENST00000625180 2167 ntBASIC19.39■□□□□ 0.69
NR1H4Q96RI1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.39■□□□□ 0.69
NR1H4Q96RI1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H4Q96RI1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 AC121338.2-201ENST00000622535 1744 ntBASIC19.37■□□□□ 0.69
NR1H4Q96RI1 AP004607.7-201ENST00000527152 1677 ntBASIC19.37■□□□□ 0.69
NR1H4Q96RI1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 AC004987.1-201ENST00000428627 508 ntBASIC19.37■□□□□ 0.69
NR1H4Q96RI1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H4Q96RI1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 ATP5G2P3-201ENST00000429083 425 ntBASIC19.36■□□□□ 0.69
NR1H4Q96RI1 AC022616.5-201ENST00000518796 181 ntBASIC19.36■□□□□ 0.69
NR1H4Q96RI1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms