Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RARRES2P10-201ENST00000564312 460 ntBASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CSMD1Q96PZ7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 AC061975.6-201ENST00000579045 1553 ntBASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 AC005363.2-201ENST00000618631 242 ntBASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 AC087388.1-201ENST00000571370 1112 ntBASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 AC053503.5-201ENST00000601508 636 ntBASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD1Q96PZ7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 DUSP5P1-201ENST00000441325 1139 ntBASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.67■□□□□ 0.42
CSMD1Q96PZ7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 AC009947.2-201ENST00000444014 672 ntBASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.66■□□□□ 0.42
CSMD1Q96PZ7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 MMP23A-201ENST00000234610 1017 ntBASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 DUX4L26-201ENST00000489078 1255 ntBASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 C1orf229-201ENST00000623686 2258 ntBASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 AC006011.2-201ENST00000621313 1158 ntBASIC17.65■□□□□ 0.42
CSMD1Q96PZ7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CSMD1Q96PZ7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms