Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 TNXA-203ENST00000507684 2038 ntBASIC17.72■□□□□ 0.43
CMTM3Q96MX0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMTM3Q96MX0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.71■□□□□ 0.42
CMTM3Q96MX0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CMTM3Q96MX0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 AC125437.2-201ENST00000625180 2167 ntBASIC17.7■□□□□ 0.42
CMTM3Q96MX0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMTM3Q96MX0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CMTM3Q96MX0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 AC055733.4-201ENST00000638462 1354 ntBASIC17.68■□□□□ 0.42
CMTM3Q96MX0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMTM3Q96MX0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 AP000974.1-201ENST00000623909 2387 ntBASIC17.67■□□□□ 0.42
CMTM3Q96MX0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms