Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CPNE4Q96A23 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CPNE4Q96A23 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE4Q96A23 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE4Q96A23 AL049796.1-201ENST00000565336 1766 ntBASIC18.51■□□□□ 0.55
CPNE4Q96A23 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE4Q96A23 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE4Q96A23 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE4Q96A23 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE4Q96A23 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.51■□□□□ 0.55
CPNE4Q96A23 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE4Q96A23 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE4Q96A23 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
CPNE4Q96A23 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE4Q96A23 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.51■□□□□ 0.55
CPNE4Q96A23 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE4Q96A23 AL050303.2-201ENST00000619798 666 ntBASIC18.51■□□□□ 0.55
CPNE4Q96A23 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CPNE4Q96A23 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CPNE4Q96A23 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE4Q96A23 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE4Q96A23 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE4Q96A23 FEM1AP4-201ENST00000443167 1987 ntBASIC18.5■□□□□ 0.55
CPNE4Q96A23 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CPNE4Q96A23 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE4Q96A23 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE4Q96A23 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CPNE4Q96A23 NCF1B-203ENST00000435988 1254 ntBASIC18.5■□□□□ 0.55
CPNE4Q96A23 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE4Q96A23 RARRES2P4-201ENST00000514074 484 ntBASIC18.5■□□□□ 0.55
CPNE4Q96A23 AF201337.1-201ENST00000520239 748 ntBASIC18.5■□□□□ 0.55
CPNE4Q96A23 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.5■□□□□ 0.55
CPNE4Q96A23 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
CPNE4Q96A23 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.5■□□□□ 0.55
CPNE4Q96A23 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE4Q96A23 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE4Q96A23 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE4Q96A23 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE4Q96A23 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE4Q96A23 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE4Q96A23 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE4Q96A23 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.5■□□□□ 0.55
CPNE4Q96A23 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE4Q96A23 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE4Q96A23 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CPNE4Q96A23 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE4Q96A23 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE4Q96A23 GPX1P1-201ENST00000388829 606 ntBASIC18.49■□□□□ 0.55
CPNE4Q96A23 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE4Q96A23 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE4Q96A23 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.49■□□□□ 0.55
CPNE4Q96A23 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE4Q96A23 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE4Q96A23 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.49■□□□□ 0.55
CPNE4Q96A23 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE4Q96A23 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE4Q96A23 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.49■□□□□ 0.55
CPNE4Q96A23 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CPNE4Q96A23 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CPNE4Q96A23 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE4Q96A23 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE4Q96A23 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE4Q96A23 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE4Q96A23 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE4Q96A23 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE4Q96A23 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE4Q96A23 AC016405.3-201ENST00000607710 860 ntBASIC18.48■□□□□ 0.55
CPNE4Q96A23 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CPNE4Q96A23 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE4Q96A23 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.48■□□□□ 0.55
CPNE4Q96A23 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE4Q96A23 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.48■□□□□ 0.55
CPNE4Q96A23 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CPNE4Q96A23 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CPNE4Q96A23 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.47■□□□□ 0.55
CPNE4Q96A23 ID1-201ENST00000376105 1233 ntBASIC18.47■□□□□ 0.55
CPNE4Q96A23 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 AL512625.2-201ENST00000417533 625 ntBASIC18.47■□□□□ 0.55
CPNE4Q96A23 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.47■□□□□ 0.55
CPNE4Q96A23 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.47■□□□□ 0.55
CPNE4Q96A23 AC083906.2-201ENST00000511578 360 ntBASIC18.47■□□□□ 0.55
CPNE4Q96A23 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 AC105036.2-201ENST00000569468 176 ntBASIC18.47■□□□□ 0.55
CPNE4Q96A23 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CPNE4Q96A23 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CPNE4Q96A23 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CPNE4Q96A23 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CPNE4Q96A23 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE4Q96A23 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms