Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP2A3Q93084 FAM201B-201ENST00000458407 597 ntBASIC21.68■■□□□ 1.06
ATP2A3Q93084 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A3Q93084 AC092118.2-201ENST00000613495 667 ntBASIC21.68■■□□□ 1.06
ATP2A3Q93084 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.68■■□□□ 1.06
ATP2A3Q93084 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A3Q93084 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A3Q93084 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP2A3Q93084 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A3Q93084 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A3Q93084 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A3Q93084 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ATP2A3Q93084 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A3Q93084 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
ATP2A3Q93084 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
ATP2A3Q93084 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
ATP2A3Q93084 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A3Q93084 AC061975.6-201ENST00000579045 1553 ntBASIC21.67■■□□□ 1.06
ATP2A3Q93084 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ATP2A3Q93084 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.67■■□□□ 1.06
ATP2A3Q93084 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP2A3Q93084 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP2A3Q93084 MIR4651-201ENST00000582622 73 ntBASIC21.67■■□□□ 1.06
ATP2A3Q93084 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP2A3Q93084 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ATP2A3Q93084 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
ATP2A3Q93084 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A3Q93084 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A3Q93084 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ATP2A3Q93084 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A3Q93084 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A3Q93084 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A3Q93084 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ATP2A3Q93084 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.66■■□□□ 1.06
ATP2A3Q93084 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP2A3Q93084 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP2A3Q93084 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ATP2A3Q93084 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A3Q93084 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A3Q93084 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP2A3Q93084 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.66■■□□□ 1.06
ATP2A3Q93084 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP2A3Q93084 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ATP2A3Q93084 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A3Q93084 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A3Q93084 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A3Q93084 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A3Q93084 BX276092.2-201ENST00000417668 665 ntBASIC21.65■■□□□ 1.06
ATP2A3Q93084 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A3Q93084 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A3Q93084 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A3Q93084 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.65■■□□□ 1.06
ATP2A3Q93084 AC244015.2-201ENST00000616358 1861 ntBASIC21.64■■□□□ 1.06
ATP2A3Q93084 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2A3Q93084 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
ATP2A3Q93084 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.64■■□□□ 1.05
ATP2A3Q93084 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2A3Q93084 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.64■■□□□ 1.05
ATP2A3Q93084 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A3Q93084 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A3Q93084 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A3Q93084 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A3Q93084 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.63■■□□□ 1.05
ATP2A3Q93084 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
ATP2A3Q93084 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.63■■□□□ 1.05
ATP2A3Q93084 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.63■■□□□ 1.05
ATP2A3Q93084 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
ATP2A3Q93084 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.63■■□□□ 1.05
ATP2A3Q93084 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP2A3Q93084 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP2A3Q93084 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A3Q93084 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A3Q93084 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A3Q93084 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ATP2A3Q93084 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.62■■□□□ 1.05
ATP2A3Q93084 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
ATP2A3Q93084 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A3Q93084 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A3Q93084 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP2A3Q93084 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP2A3Q93084 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.62■■□□□ 1.05
ATP2A3Q93084 RARRES2P4-201ENST00000514074 484 ntBASIC21.62■■□□□ 1.05
ATP2A3Q93084 RNA5SP413-201ENST00000516373 109 ntBASIC21.62■■□□□ 1.05
ATP2A3Q93084 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP2A3Q93084 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.62■■□□□ 1.05
ATP2A3Q93084 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A3Q93084 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A3Q93084 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms