Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HPS1Q92902 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HPS1Q92902 BX323043.1-201ENST00000641006 1765 ntBASIC18.7■□□□□ 0.58
HPS1Q92902 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS1Q92902 AC133637.1-201ENST00000624115 1537 ntBASIC18.7■□□□□ 0.58
HPS1Q92902 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.7■□□□□ 0.58
HPS1Q92902 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS1Q92902 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS1Q92902 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS1Q92902 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS1Q92902 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS1Q92902 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS1Q92902 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS1Q92902 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS1Q92902 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS1Q92902 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS1Q92902 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HPS1Q92902 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS1Q92902 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS1Q92902 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HPS1Q92902 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HPS1Q92902 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HPS1Q92902 SMG8-203ENST00000578922 2178 ntBASIC18.69■□□□□ 0.58
HPS1Q92902 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS1Q92902 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS1Q92902 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS1Q92902 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.69■□□□□ 0.58
HPS1Q92902 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS1Q92902 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS1Q92902 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS1Q92902 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS1Q92902 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS1Q92902 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS1Q92902 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.69■□□□□ 0.58
HPS1Q92902 AC079416.2-201ENST00000625035 1193 ntBASIC18.69■□□□□ 0.58
HPS1Q92902 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HPS1Q92902 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS1Q92902 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS1Q92902 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS1Q92902 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS1Q92902 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS1Q92902 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.68■□□□□ 0.58
HPS1Q92902 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS1Q92902 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.68■□□□□ 0.58
HPS1Q92902 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.68■□□□□ 0.58
HPS1Q92902 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS1Q92902 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS1Q92902 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.68■□□□□ 0.58
HPS1Q92902 AC126544.1-201ENST00000580842 1059 ntBASIC18.68■□□□□ 0.58
HPS1Q92902 AC087623.3-201ENST00000607047 1098 ntBASIC18.68■□□□□ 0.58
HPS1Q92902 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS1Q92902 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HPS1Q92902 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS1Q92902 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.68■□□□□ 0.58
HPS1Q92902 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPS1Q92902 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HPS1Q92902 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPS1Q92902 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS1Q92902 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HPS1Q92902 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.67■□□□□ 0.58
HPS1Q92902 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS1Q92902 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HPS1Q92902 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HPS1Q92902 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS1Q92902 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.67■□□□□ 0.58
HPS1Q92902 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.67■□□□□ 0.58
HPS1Q92902 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.67■□□□□ 0.58
HPS1Q92902 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.67■□□□□ 0.58
HPS1Q92902 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HPS1Q92902 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS1Q92902 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
HPS1Q92902 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS1Q92902 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS1Q92902 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HPS1Q92902 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS1Q92902 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS1Q92902 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS1Q92902 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS1Q92902 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS1Q92902 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.66■□□□□ 0.58
HPS1Q92902 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS1Q92902 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS1Q92902 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.65■□□□□ 0.58
HPS1Q92902 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS1Q92902 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS1Q92902 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS1Q92902 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HPS1Q92902 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.65■□□□□ 0.58
HPS1Q92902 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS1Q92902 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS1Q92902 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS1Q92902 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HPS1Q92902 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HPS1Q92902 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS1Q92902 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.65■□□□□ 0.58
HPS1Q92902 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.65■□□□□ 0.58
HPS1Q92902 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS1Q92902 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.65■□□□□ 0.58
HPS1Q92902 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS1Q92902 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms