Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 AC092720.2-201ENST00000602388 1665 ntBASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 TNXA-203ENST00000507684 2038 ntBASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CKAP2Q8WWK9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CKAP2Q8WWK9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.46■□□□□ 0.87
CKAP2Q8WWK9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CKAP2Q8WWK9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CKAP2Q8WWK9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CKAP2Q8WWK9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CKAP2Q8WWK9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.46■□□□□ 0.87
CKAP2Q8WWK9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CKAP2Q8WWK9 AP005435.1-201ENST00000529293 1178 ntBASIC20.46■□□□□ 0.87
CKAP2Q8WWK9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CKAP2Q8WWK9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
CKAP2Q8WWK9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
CKAP2Q8WWK9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CKAP2Q8WWK9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.45■□□□□ 0.86
CKAP2Q8WWK9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CKAP2Q8WWK9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.45■□□□□ 0.86
CKAP2Q8WWK9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CKAP2Q8WWK9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CKAP2Q8WWK9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CKAP2Q8WWK9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CKAP2Q8WWK9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CKAP2Q8WWK9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CKAP2Q8WWK9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CKAP2Q8WWK9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CKAP2Q8WWK9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.43■□□□□ 0.86
CKAP2Q8WWK9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CKAP2Q8WWK9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CKAP2Q8WWK9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CKAP2Q8WWK9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CKAP2Q8WWK9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.43■□□□□ 0.86
CKAP2Q8WWK9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CKAP2Q8WWK9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CKAP2Q8WWK9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CKAP2Q8WWK9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms