Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 AC007322.4-201ENST00000509611 723 ntBASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.5■■□□□ 1.51
NKX2-3Q8TAU0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 AC013268.1-206ENST00000638368 961 ntBASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 AC112229.1-201ENST00000639295 961 ntBASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
NKX2-3Q8TAU0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 MIPEPP3-201ENST00000412105 444 ntBASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 CYP2T1P-201ENST00000432607 1285 ntBASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 AC093787.1-201ENST00000450396 207 ntBASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
NKX2-3Q8TAU0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 RARRES2P4-201ENST00000514074 484 ntBASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 PLK5-205ENST00000642079 1969 ntBASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NKX2-3Q8TAU0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NKX2-3Q8TAU0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
NKX2-3Q8TAU0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 AC142381.4-202ENST00000563973 229 ntBASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
NKX2-3Q8TAU0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms