Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 Z99916.2-201ENST00000604037 246 ntBASIC16.12■□□□□ 0.17
LINC01006Q8NI28 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LINC01006Q8NI28 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01006Q8NI28 AC087633.2-202ENST00000565166 1439 ntBASIC16.11■□□□□ 0.17
LINC01006Q8NI28 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LINC01006Q8NI28 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 PGM5P4-201ENST00000421970 445 ntBASIC16.09■□□□□ 0.17
LINC01006Q8NI28 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 AC242852.2-201ENST00000615738 1807 ntBASIC16.09■□□□□ 0.17
LINC01006Q8NI28 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01006Q8NI28 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.08■□□□□ 0.17
LINC01006Q8NI28 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.08■□□□□ 0.17
LINC01006Q8NI28 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC01006Q8NI28 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC01006Q8NI28 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC01006Q8NI28 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC01006Q8NI28 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01006Q8NI28 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms