Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
SPTSSBQ8NFR3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SPTSSBQ8NFR3 AC018445.3-201ENST00000624177 1945 ntBASIC11.35□□□□□ -0.59
SPTSSBQ8NFR3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SPTSSBQ8NFR3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SPTSSBQ8NFR3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
SPTSSBQ8NFR3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 AL359258.2-201ENST00000564063 1566 ntBASIC11.33□□□□□ -0.6
SPTSSBQ8NFR3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SPTSSBQ8NFR3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms