Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRFBP1Q8NEF9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.66■□□□□ 0.74
SRFBP1Q8NEF9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SRFBP1Q8NEF9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 AC006128.1-201ENST00000624704 1661 ntBASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 AC007322.4-201ENST00000509611 723 ntBASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 AL162412.1-201ENST00000567129 965 ntBASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 MFSD11-216ENST00000590393 1141 ntBASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 AC011767.1-201ENST00000617410 1153 ntBASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRFBP1Q8NEF9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SRFBP1Q8NEF9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SRFBP1Q8NEF9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 AC007322.3-201ENST00000426526 701 ntBASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 AL591742.1-201ENST00000604433 565 ntBASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SRFBP1Q8NEF9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 PLK5-205ENST00000642079 1969 ntBASIC19.63■□□□□ 0.73
SRFBP1Q8NEF9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 AC231657.2-201ENST00000624556 255 ntBASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRFBP1Q8NEF9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SRFBP1Q8NEF9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRFBP1Q8NEF9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRFBP1Q8NEF9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRFBP1Q8NEF9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.61■□□□□ 0.73
SRFBP1Q8NEF9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRFBP1Q8NEF9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRFBP1Q8NEF9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.61■□□□□ 0.73
SRFBP1Q8NEF9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRFBP1Q8NEF9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRFBP1Q8NEF9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms