Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK4Q8NE63 AC003102.1-202ENST00000563394 1796 ntBASIC19.94■□□□□ 0.78
HIPK4Q8NE63 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.94■□□□□ 0.78
HIPK4Q8NE63 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.94■□□□□ 0.78
HIPK4Q8NE63 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK4Q8NE63 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.94■□□□□ 0.78
HIPK4Q8NE63 AL034346.1-201ENST00000568244 1277 ntBASIC19.94■□□□□ 0.78
HIPK4Q8NE63 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HIPK4Q8NE63 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK4Q8NE63 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK4Q8NE63 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIPK4Q8NE63 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 AL138724.1-201ENST00000606771 1088 ntBASIC19.93■□□□□ 0.78
HIPK4Q8NE63 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 AC020907.5-201ENST00000624372 1936 ntBASIC19.93■□□□□ 0.78
HIPK4Q8NE63 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIPK4Q8NE63 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIPK4Q8NE63 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.91■□□□□ 0.78
HIPK4Q8NE63 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 SYT6-210ENST00000641643 1587 ntBASIC19.91■□□□□ 0.78
HIPK4Q8NE63 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIPK4Q8NE63 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 SERBP1P1-201ENST00000396021 1160 ntBASIC19.9■□□□□ 0.78
HIPK4Q8NE63 DUX4L19-201ENST00000557448 1267 ntBASIC19.9■□□□□ 0.78
HIPK4Q8NE63 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.9■□□□□ 0.78
HIPK4Q8NE63 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIPK4Q8NE63 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms