Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RDH13Q8NBN7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.56■■□□□ 1.2
RDH13Q8NBN7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RDH13Q8NBN7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
RDH13Q8NBN7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RDH13Q8NBN7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RDH13Q8NBN7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RDH13Q8NBN7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.53■■□□□ 1.2
RDH13Q8NBN7 AC116050.2-201ENST00000612102 1779 ntBASIC22.53■■□□□ 1.2
RDH13Q8NBN7 AC011484.1-201ENST00000377652 1995 ntBASIC22.52■■□□□ 1.2
RDH13Q8NBN7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 AC006128.1-201ENST00000624704 1661 ntBASIC22.52■■□□□ 1.2
RDH13Q8NBN7 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.52■■□□□ 1.2
RDH13Q8NBN7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 AC080038.1-201ENST00000611274 1154 ntBASIC22.52■■□□□ 1.2
RDH13Q8NBN7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RDH13Q8NBN7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RDH13Q8NBN7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.52■■□□□ 1.19
RDH13Q8NBN7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RDH13Q8NBN7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RDH13Q8NBN7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RDH13Q8NBN7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.51■■□□□ 1.19
RDH13Q8NBN7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RDH13Q8NBN7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RDH13Q8NBN7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RDH13Q8NBN7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RDH13Q8NBN7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RDH13Q8NBN7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.5■■□□□ 1.19
RDH13Q8NBN7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RDH13Q8NBN7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RDH13Q8NBN7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
RDH13Q8NBN7 CNN2P6-201ENST00000439038 900 ntBASIC22.5■■□□□ 1.19
RDH13Q8NBN7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.5■■□□□ 1.19
RDH13Q8NBN7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms