Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRPF38AQ8NAV1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 AC006058.3-201ENST00000606217 1069 ntBASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.85■■□□□ 1.41
PRPF38AQ8NAV1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRPF38AQ8NAV1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF38AQ8NAV1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF38AQ8NAV1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF38AQ8NAV1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF38AQ8NAV1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF38AQ8NAV1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.83■■□□□ 1.41
PRPF38AQ8NAV1 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.83■■□□□ 1.41
PRPF38AQ8NAV1 AP003097.1-201ENST00000530657 1135 ntBASIC23.83■■□□□ 1.41
PRPF38AQ8NAV1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.83■■□□□ 1.41
PRPF38AQ8NAV1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRPF38AQ8NAV1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PRPF38AQ8NAV1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
PRPF38AQ8NAV1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.83■■□□□ 1.4
PRPF38AQ8NAV1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.83■■□□□ 1.4
PRPF38AQ8NAV1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
PRPF38AQ8NAV1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 AC128676.1-201ENST00000454392 318 ntBASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PRPF38AQ8NAV1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPF38AQ8NAV1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.81■■□□□ 1.4
PRPF38AQ8NAV1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PRPF38AQ8NAV1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRPF38AQ8NAV1 AC105020.6-201ENST00000621523 1217 ntBASIC23.81■■□□□ 1.4
PRPF38AQ8NAV1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 AC098590.1-201ENST00000468126 897 ntBASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PRPF38AQ8NAV1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRPF38AQ8NAV1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PRPF38AQ8NAV1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms