Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC33Q8N5R6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC33Q8N5R6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC33Q8N5R6 AC053503.5-201ENST00000601508 636 ntBASIC21.6■■□□□ 1.05
CCDC33Q8N5R6 AC013268.1-206ENST00000638368 961 ntBASIC21.6■■□□□ 1.05
CCDC33Q8N5R6 AC112229.1-201ENST00000639295 961 ntBASIC21.6■■□□□ 1.05
CCDC33Q8N5R6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC33Q8N5R6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CCDC33Q8N5R6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC33Q8N5R6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC33Q8N5R6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC33Q8N5R6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC33Q8N5R6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC33Q8N5R6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC33Q8N5R6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC33Q8N5R6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC33Q8N5R6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC33Q8N5R6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC33Q8N5R6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC33Q8N5R6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.58■■□□□ 1.05
CCDC33Q8N5R6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCDC33Q8N5R6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC33Q8N5R6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC33Q8N5R6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CCDC33Q8N5R6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC33Q8N5R6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 AC068338.2-201ENST00000563278 1430 ntBASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 CYP2T1P-201ENST00000432607 1285 ntBASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC33Q8N5R6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 SLC7A5P1-201ENST00000568957 537 ntBASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 AC066615.1-201ENST00000640911 628 ntBASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC33Q8N5R6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 FAM201B-201ENST00000458407 597 ntBASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC33Q8N5R6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms