Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM42Q8IWZ5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
TRIM42Q8IWZ5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM42Q8IWZ5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 FP700111.2-201ENST00000619190 1892 ntBASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM42Q8IWZ5 AL512408.1-201ENST00000569378 2000 ntBASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM42Q8IWZ5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM42Q8IWZ5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
TRIM42Q8IWZ5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms