Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC28Q86X40 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LRRC28Q86X40 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LRRC28Q86X40 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC28Q86X40 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 AC097381.1-201ENST00000429019 1296 ntBASIC18.29■□□□□ 0.52
LRRC28Q86X40 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LRRC28Q86X40 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC28Q86X40 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC28Q86X40 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LRRC28Q86X40 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LRRC28Q86X40 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC28Q86X40 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC28Q86X40 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC28Q86X40 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LRRC28Q86X40 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC28Q86X40 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRC28Q86X40 AC012414.1-201ENST00000556676 535 ntBASIC18.28■□□□□ 0.52
LRRC28Q86X40 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC28Q86X40 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LRRC28Q86X40 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC28Q86X40 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC28Q86X40 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC28Q86X40 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC28Q86X40 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC28Q86X40 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC28Q86X40 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC28Q86X40 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC28Q86X40 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC28Q86X40 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
LRRC28Q86X40 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC28Q86X40 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC28Q86X40 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRC28Q86X40 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC28Q86X40 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC28Q86X40 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC28Q86X40 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.27■□□□□ 0.52
LRRC28Q86X40 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC28Q86X40 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.27■□□□□ 0.52
LRRC28Q86X40 AC105233.4-201ENST00000642045 216 ntBASIC18.27■□□□□ 0.52
LRRC28Q86X40 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC28Q86X40 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC28Q86X40 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.27■□□□□ 0.51
LRRC28Q86X40 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRC28Q86X40 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRC28Q86X40 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LRRC28Q86X40 PLK5-205ENST00000642079 1969 ntBASIC18.26■□□□□ 0.51
LRRC28Q86X40 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC28Q86X40 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC28Q86X40 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC28Q86X40 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC28Q86X40 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRRC28Q86X40 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRRC28Q86X40 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC28Q86X40 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC28Q86X40 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
LRRC28Q86X40 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC28Q86X40 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC28Q86X40 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC28Q86X40 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC28Q86X40 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 AC027612.3-201ENST00000413684 1047 ntBASIC18.25■□□□□ 0.51
LRRC28Q86X40 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 MIR5787-201ENST00000611784 55 ntBASIC18.25■□□□□ 0.51
LRRC28Q86X40 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRRC28Q86X40 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms