Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 AL512408.1-201ENST00000569378 2000 ntBASIC21.23■□□□□ 0.99
CCDC25Q86WR0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 RNF165-205ENST00000588679 2904 ntBASIC21.23■□□□□ 0.99
CCDC25Q86WR0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC25Q86WR0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC25Q86WR0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 AC131281.2-201ENST00000520478 145 ntBASIC21.21■□□□□ 0.99
CCDC25Q86WR0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC25Q86WR0 AC009237.3-201ENST00000393279 1427 ntBASIC21.21■□□□□ 0.99
CCDC25Q86WR0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC25Q86WR0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
CCDC25Q86WR0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.2■□□□□ 0.99
CCDC25Q86WR0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC25Q86WR0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 BX842568.3-201ENST00000418104 571 ntBASIC21.19■□□□□ 0.98
CCDC25Q86WR0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 AC133561.4-201ENST00000566112 224 ntBASIC21.19■□□□□ 0.98
CCDC25Q86WR0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 AC055733.4-201ENST00000638462 1354 ntBASIC21.19■□□□□ 0.98
CCDC25Q86WR0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC25Q86WR0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms