Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC10.93□□□□□ -0.664e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-231ENST00000526797 659 ntTSL 410.91□□□□□ -0.664e-6■■■□□ 17.7
LARP4Q71RC2 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC10.78□□□□□ -0.684e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-221ENST00000550100 1480 ntTSL 210.76□□□□□ -0.694e-6■■■□□ 17.7
LARP4Q71RC2 STIL-202ENST00000360380 5225 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.734e-6■■■□□ 17.7
LARP4Q71RC2 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.734e-6■■■□□ 17.7
LARP4Q71RC2 LINC00958-201ENST00000504230 1558 ntTSL 2 BASIC10.35□□□□□ -0.754e-6■■■□□ 17.7
LARP4Q71RC2 SIL1-208ENST00000505945 250 ntTSL 1 (best)10.3□□□□□ -0.764e-6■■■□□ 17.7
LARP4Q71RC2 BNIP3L-203ENST00000520077 922 ntTSL 1 (best)10.25□□□□□ -0.774e-6■■■□□ 17.7
LARP4Q71RC2 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC10.2□□□□□ -0.784e-6■■■□□ 17.7
LARP4Q71RC2 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC10.17□□□□□ -0.784e-6■■■□□ 17.7
LARP4Q71RC2 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC9.97□□□□□ -0.814e-6■■■□□ 17.7
LARP4Q71RC2 CCDC136-214ENST00000494552 3320 ntAPPRIS ALT2 TSL 1 (best)9.89□□□□□ -0.834e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-220ENST00000559880 717 ntTSL 39.78□□□□□ -0.844e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.874e-6■■■□□ 17.7
LARP4Q71RC2 LINC01572-206ENST00000624829 1666 ntTSL 5 BASIC9.62□□□□□ -0.874e-6■■■□□ 17.7
LARP4Q71RC2 RNVU1-1-201ENST00000384610 164 ntBASIC9.5□□□□□ -0.894e-6■■■□□ 17.7
LARP4Q71RC2 CCDC136-201ENST00000297788 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.914e-6■■■□□ 17.7
LARP4Q71RC2 SEC31A-218ENST00000506495 541 ntTSL 49.35□□□□□ -0.914e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-226ENST00000628684 1040 ntTSL 5 BASIC9.34□□□□□ -0.914e-6■■■□□ 17.7
LARP4Q71RC2 GTF2I-201ENST00000432143 572 ntTSL 49.31□□□□□ -0.924e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-234ENST00000552645 1623 ntTSL 1 (best)9.22□□□□□ -0.934e-6■■■□□ 17.7
LARP4Q71RC2 MIA3-202ENST00000344507 2026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.984e-6■■■□□ 17.7
LARP4Q71RC2 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC8.94□□□□□ -0.984e-6■■■□□ 17.7
LARP4Q71RC2 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.994e-6■■■□□ 17.7
LARP4Q71RC2 CCDC136-209ENST00000480137 3732 ntTSL 28.76□□□□□ -1.014e-6■■■□□ 17.7
LARP4Q71RC2 ARID4A-201ENST00000348476 5562 ntTSL 5 BASIC8.64□□□□□ -1.034e-6■■■□□ 17.7
LARP4Q71RC2 QKI-208ENST00000537041 583 ntTSL 58.62□□□□□ -1.032e-6■■■□□ 17.7
LARP4Q71RC2 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC8.61□□□□□ -1.034e-6■■■□□ 17.7
LARP4Q71RC2 LINC00958-203ENST00000527945 1121 ntTSL 2 BASIC8.5□□□□□ -1.054e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-217ENST00000548516 850 ntTSL 58.43□□□□□ -1.064e-6■■■□□ 17.7
LARP4Q71RC2 SEC31A-220ENST00000507051 458 ntTSL 48.38□□□□□ -1.074e-6■■■□□ 17.7
LARP4Q71RC2 BNIP3L-207ENST00000523949 875 ntTSL 38.37□□□□□ -1.074e-6■■■□□ 17.7
LARP4Q71RC2 CCDC136-207ENST00000471729 495 ntTSL 38.28□□□□□ -1.084e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-228ENST00000550929 1389 ntTSL 1 (best) BASIC8.22□□□□□ -1.094e-6■■■□□ 17.7
LARP4Q71RC2 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.14e-6■■■□□ 17.7
LARP4Q71RC2 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.114e-6■■■□□ 17.7
LARP4Q71RC2 QKI-209ENST00000537124 551 ntTSL 58.05□□□□□ -1.122e-6■■■□□ 17.7
LARP4Q71RC2 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.144e-6■■■□□ 17.7
LARP4Q71RC2 RPS6KA3-206ENST00000492128 553 ntTSL 47.95□□□□□ -1.144e-6■■■□□ 17.7
LARP4Q71RC2 QKI-210ENST00000537883 1106 ntTSL 37.95□□□□□ -1.142e-6■■■□□ 17.7
LARP4Q71RC2 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC7.92□□□□□ -1.144e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-208ENST00000492526 3022 ntTSL 27.88□□□□□ -1.154e-6■■■□□ 17.7
LARP4Q71RC2 SSRP1-205ENST00000635721 675 ntTSL 57.66□□□□□ -1.183e-11■■■□□ 17.7
LARP4Q71RC2 PPP2R2A-205ENST00000518215 1163 ntTSL 37.6□□□□□ -1.194e-6■■■□□ 17.7
LARP4Q71RC2 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.244e-6■■■□□ 17.7
LARP4Q71RC2 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.254e-6■■■□□ 17.7
LARP4Q71RC2 LINC00958-206ENST00000532541 1124 ntTSL 37.24□□□□□ -1.254e-6■■■□□ 17.7
LARP4Q71RC2 LINC00958-207ENST00000534477 888 ntTSL 37.24□□□□□ -1.254e-6■■■□□ 17.7
LARP4Q71RC2 QKI-214ENST00000544436 495 ntTSL 37.17□□□□□ -1.262e-6■■■□□ 17.7
LARP4Q71RC2 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.1□□□□□ -1.274e-6■■■□□ 17.7
LARP4Q71RC2 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.284e-6■■■□□ 17.7
LARP4Q71RC2 SEC31A-222ENST00000507676 551 ntTSL 47□□□□□ -1.294e-6■■■□□ 17.7
LARP4Q71RC2 SEC31A-211ENST00000503210 553 ntTSL 46.93□□□□□ -1.34e-6■■■□□ 17.7
LARP4Q71RC2 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.79□□□□□ -1.324e-6■■■□□ 17.7
LARP4Q71RC2 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.334e-6■■■□□ 17.7
LARP4Q71RC2 DNAH14-213ENST00000453375 456 ntTSL 26.73□□□□□ -1.334e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-238ENST00000623495 2948 nt6.62□□□□□ -1.354e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-219ENST00000549395 475 ntTSL 36.62□□□□□ -1.354e-6■■■□□ 17.7
LARP4Q71RC2 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.364e-6■■■□□ 17.7
LARP4Q71RC2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.55□□□□□ -1.364e-6■■■□□ 17.7
LARP4Q71RC2 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.364e-6■■■□□ 17.7
LARP4Q71RC2 PPP2R2A-204ENST00000518208 1490 ntTSL 26.48□□□□□ -1.374e-6■■■□□ 17.7
LARP4Q71RC2 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.374e-6■■■□□ 17.7
LARP4Q71RC2 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.45□□□□□ -1.384e-6■■■□□ 17.7
LARP4Q71RC2 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.38□□□□□ -1.394e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-213ENST00000557950 924 ntTSL 36.35□□□□□ -1.394e-6■■■□□ 17.7
LARP4Q71RC2 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.44e-6■■■□□ 17.7
LARP4Q71RC2 PLCL1-205ENST00000487695 3083 ntTSL 56.1□□□□□ -1.431e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-204ENST00000546814 894 ntTSL 25.99□□□□□ -1.454e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-236ENST00000553043 727 ntTSL 25.91□□□□□ -1.464e-6■■■□□ 17.7
LARP4Q71RC2 PPP2R2A-208ENST00000518890 1237 ntTSL 25.9□□□□□ -1.464e-6■■■□□ 17.7
LARP4Q71RC2 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.89□□□□□ -1.472e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-208ENST00000547256 618 ntTSL 25.87□□□□□ -1.474e-6■■■□□ 17.7
LARP4Q71RC2 PRELID2-205ENST00000510259 525 ntTSL 35.84□□□□□ -1.474e-6■■■□□ 17.7
LARP4Q71RC2 GOLGB1-205ENST00000482512 10295 ntTSL 1 (best)5.83□□□□□ -1.484e-6■■■□□ 17.7
LARP4Q71RC2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.81□□□□□ -1.484e-6■■■□□ 17.7
LARP4Q71RC2 QKI-215ENST00000544823 597 ntTSL 25.77□□□□□ -1.492e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-201ENST00000249736 1373 ntAPPRIS ALT2 TSL 55.67□□□□□ -1.54e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-215ENST00000558486 585 ntTSL 45.66□□□□□ -1.54e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-217ENST00000558756 896 ntTSL 55.66□□□□□ -1.54e-6■■■□□ 17.7
LARP4Q71RC2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.55□□□□□ -1.524e-6■■■□□ 17.7
LARP4Q71RC2 LINC00958-204ENST00000529328 580 ntTSL 35.49□□□□□ -1.534e-6■■■□□ 17.7
LARP4Q71RC2 MIA3-204ENST00000354906 3045 ntTSL 55.49□□□□□ -1.534e-6■■■□□ 17.7
LARP4Q71RC2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.554e-6■■■□□ 17.7
LARP4Q71RC2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.554e-6■■■□□ 17.7
LARP4Q71RC2 AC073869.8-201ENST00000641806 335 ntBASIC5.33□□□□□ -1.564e-6■■■□□ 17.7
LARP4Q71RC2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.584e-6■■■□□ 17.7
LARP4Q71RC2 LINC00958-205ENST00000531402 590 ntTSL 44.97□□□□□ -1.614e-6■■■□□ 17.7
LARP4Q71RC2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.93□□□□□ -1.624e-6■■■□□ 17.7
LARP4Q71RC2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.9□□□□□ -1.634e-6■■■□□ 17.7
LARP4Q71RC2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.644e-6■■■□□ 17.7
LARP4Q71RC2 QKI-216ENST00000545346 457 ntTSL 54.78□□□□□ -1.642e-6■■■□□ 17.7
LARP4Q71RC2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.654e-6■■■□□ 17.7
LARP4Q71RC2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.654e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-219ENST00000559305 559 ntTSL 44.66□□□□□ -1.664e-6■■■□□ 17.7
LARP4Q71RC2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.674e-6■■■□□ 17.7
LARP4Q71RC2 ARID4A-204ENST00000417477 2537 ntTSL 1 (best)4.56□□□□□ -1.684e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-224ENST00000560682 495 ntTSL 34.53□□□□□ -1.684e-6■■■□□ 17.7
LARP4Q71RC2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.52□□□□□ -1.692e-6■■■□□ 17.7
Retrieved 100 of 15,922 protein–RNA pairs in 492.2 ms