Protein–RNA interactions for Protein: Q6UW01

CBLN3, Cerebellin-3, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3Q6UW01 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBLN3Q6UW01 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBLN3Q6UW01 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.84■□□□□ 0.61
CBLN3Q6UW01 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.84■□□□□ 0.61
CBLN3Q6UW01 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBLN3Q6UW01 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.84■□□□□ 0.61
CBLN3Q6UW01 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBLN3Q6UW01 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CBLN3Q6UW01 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBLN3Q6UW01 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBLN3Q6UW01 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CBLN3Q6UW01 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBLN3Q6UW01 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBLN3Q6UW01 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBLN3Q6UW01 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBLN3Q6UW01 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBLN3Q6UW01 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBLN3Q6UW01 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.82■□□□□ 0.6
CBLN3Q6UW01 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 AC004911.1-201ENST00000416316 871 ntBASIC18.82■□□□□ 0.6
CBLN3Q6UW01 CNN2P6-201ENST00000439038 900 ntBASIC18.82■□□□□ 0.6
CBLN3Q6UW01 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 AC013268.1-206ENST00000638368 961 ntBASIC18.82■□□□□ 0.6
CBLN3Q6UW01 AC112229.1-201ENST00000639295 961 ntBASIC18.82■□□□□ 0.6
CBLN3Q6UW01 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.82■□□□□ 0.6
CBLN3Q6UW01 AL157384.1-201ENST00000445995 2473 ntBASIC18.81■□□□□ 0.6
CBLN3Q6UW01 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 AL137784.2-201ENST00000607332 1000 ntBASIC18.81■□□□□ 0.6
CBLN3Q6UW01 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CBLN3Q6UW01 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBLN3Q6UW01 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms