Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 AC006015.1-201ENST00000429970 570 ntBASIC22.32■■□□□ 1.16
CBWD3Q5JTY5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD3Q5JTY5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.32■■□□□ 1.16
CBWD3Q5JTY5 AC073314.1-201ENST00000568729 2216 ntBASIC22.32■■□□□ 1.16
CBWD3Q5JTY5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CBWD3Q5JTY5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD3Q5JTY5 FP700111.2-201ENST00000619190 1892 ntBASIC22.32■■□□□ 1.16
CBWD3Q5JTY5 LINC01006-201ENST00000333319 2292 ntBASIC22.32■■□□□ 1.16
CBWD3Q5JTY5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD3Q5JTY5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD3Q5JTY5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD3Q5JTY5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 AC092667.1-201ENST00000434301 2586 ntBASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 MFSD11-216ENST00000590393 1141 ntBASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 AC010536.3-201ENST00000620306 533 ntBASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CBWD3Q5JTY5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD3Q5JTY5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 TERF1P5-201ENST00000477545 1207 ntBASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 AC027702.1-201ENST00000563810 1770 ntBASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.29■■□□□ 1.16
CBWD3Q5JTY5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 AL121603.2-201ENST00000557373 2117 ntBASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 AC016769.1-201ENST00000409132 1010 ntBASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 KRT18P11-201ENST00000435214 1283 ntBASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD3Q5JTY5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 AP005212.1-201ENST00000581547 1997 ntBASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 AC022517.1-201ENST00000592429 346 ntBASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 AC011767.1-201ENST00000617410 1153 ntBASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CBWD3Q5JTY5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms