Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 PBX2P1-201ENST00000493219 1291 ntBASIC20.05■□□□□ 0.8
LSM12Q3MHD2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM12Q3MHD2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM12Q3MHD2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM12Q3MHD2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.04■□□□□ 0.8
LSM12Q3MHD2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM12Q3MHD2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSM12Q3MHD2 AC096631.2-201ENST00000436136 790 ntBASIC20.04■□□□□ 0.8
LSM12Q3MHD2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.04■□□□□ 0.8
LSM12Q3MHD2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.04■□□□□ 0.8
LSM12Q3MHD2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.04■□□□□ 0.8
LSM12Q3MHD2 AC008764.7-201ENST00000593779 1081 ntBASIC20.04■□□□□ 0.8
LSM12Q3MHD2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSM12Q3MHD2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM12Q3MHD2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LSM12Q3MHD2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.03■□□□□ 0.8
LSM12Q3MHD2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM12Q3MHD2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM12Q3MHD2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM12Q3MHD2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM12Q3MHD2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.02■□□□□ 0.8
LSM12Q3MHD2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.02■□□□□ 0.8
LSM12Q3MHD2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.02■□□□□ 0.8
LSM12Q3MHD2 AC027682.1-201ENST00000562846 899 ntBASIC20.02■□□□□ 0.8
LSM12Q3MHD2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.02■□□□□ 0.8
LSM12Q3MHD2 AC106739.1-201ENST00000617035 715 ntBASIC20.02■□□□□ 0.8
LSM12Q3MHD2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LSM12Q3MHD2 AC011484.1-201ENST00000377652 1995 ntBASIC20.02■□□□□ 0.8
LSM12Q3MHD2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LSM12Q3MHD2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LSM12Q3MHD2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSM12Q3MHD2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LSM12Q3MHD2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.02■□□□□ 0.79
LSM12Q3MHD2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.02■□□□□ 0.79
LSM12Q3MHD2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
LSM12Q3MHD2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
LSM12Q3MHD2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 AC099791.1-201ENST00000416440 715 ntBASIC20.01■□□□□ 0.79
LSM12Q3MHD2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSM12Q3MHD2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM12Q3MHD2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM12Q3MHD2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20■□□□□ 0.79
LSM12Q3MHD2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM12Q3MHD2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20■□□□□ 0.79
LSM12Q3MHD2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM12Q3MHD2 EDA-201ENST00000338901 1233 ntBASIC20■□□□□ 0.79
LSM12Q3MHD2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20■□□□□ 0.79
LSM12Q3MHD2 GRAMD4P2-201ENST00000423297 1097 ntBASIC20■□□□□ 0.79
LSM12Q3MHD2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20■□□□□ 0.79
LSM12Q3MHD2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
LSM12Q3MHD2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSM12Q3MHD2 GRAMD4P4-201ENST00000613563 1115 ntBASIC20■□□□□ 0.79
LSM12Q3MHD2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20■□□□□ 0.79
LSM12Q3MHD2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM12Q3MHD2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LSM12Q3MHD2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20■□□□□ 0.79
LSM12Q3MHD2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20■□□□□ 0.79
LSM12Q3MHD2 AC005224.4-201ENST00000583262 1652 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms