Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPL39P62891 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPL39P62891 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RPL39P62891 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.56□□□□□ -0.08
RPL39P62891 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RPL39P62891 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.55□□□□□ -0.08
RPL39P62891 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RPL39P62891 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RPL39P62891 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.55□□□□□ -0.08
RPL39P62891 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.55□□□□□ -0.08
RPL39P62891 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RPL39P62891 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.55□□□□□ -0.08
RPL39P62891 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RPL39P62891 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPL39P62891 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RPL39P62891 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RPL39P62891 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.54□□□□□ -0.08
RPL39P62891 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPL39P62891 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPL39P62891 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPL39P62891 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.54□□□□□ -0.08
RPL39P62891 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RPL39P62891 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
RPL39P62891 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RPL39P62891 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPL39P62891 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RPL39P62891 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RPL39P62891 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.54□□□□□ -0.08
RPL39P62891 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RPL39P62891 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPL39P62891 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPL39P62891 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RPL39P62891 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
RPL39P62891 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RPL39P62891 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL39P62891 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.53□□□□□ -0.08
RPL39P62891 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RPL39P62891 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.53□□□□□ -0.08
RPL39P62891 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.53□□□□□ -0.08
RPL39P62891 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.53□□□□□ -0.08
RPL39P62891 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL39P62891 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
RPL39P62891 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.53□□□□□ -0.08
RPL39P62891 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL39P62891 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.53□□□□□ -0.08
RPL39P62891 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL39P62891 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RPL39P62891 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.53□□□□□ -0.08
RPL39P62891 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL39P62891 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL39P62891 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL39P62891 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.53□□□□□ -0.08
RPL39P62891 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPL39P62891 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.52□□□□□ -0.08
RPL39P62891 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPL39P62891 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
RPL39P62891 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPL39P62891 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
RPL39P62891 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.52□□□□□ -0.08
RPL39P62891 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RPL39P62891 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
RPL39P62891 SMG8-203ENST00000578922 2178 ntBASIC14.52□□□□□ -0.08
RPL39P62891 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPL39P62891 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RPL39P62891 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RPL39P62891 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPL39P62891 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
RPL39P62891 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPL39P62891 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPL39P62891 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPL39P62891 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPL39P62891 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPL39P62891 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPL39P62891 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.52□□□□□ -0.09
RPL39P62891 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.52□□□□□ -0.09
RPL39P62891 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPL39P62891 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.52□□□□□ -0.09
RPL39P62891 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPL39P62891 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL39P62891 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.51□□□□□ -0.09
RPL39P62891 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPL39P62891 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL39P62891 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL39P62891 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RPL39P62891 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
RPL39P62891 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RPL39P62891 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.51□□□□□ -0.09
RPL39P62891 AC009299.2-201ENST00000482477 511 ntBASIC14.51□□□□□ -0.09
RPL39P62891 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms