Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4XP62701 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4XP62701 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.63■□□□□ 0.57
RPS4XP62701 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.63■□□□□ 0.57
RPS4XP62701 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4XP62701 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4XP62701 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RPS4XP62701 AC092667.1-201ENST00000434301 2586 ntBASIC18.63■□□□□ 0.57
RPS4XP62701 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4XP62701 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS4XP62701 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.62■□□□□ 0.57
RPS4XP62701 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4XP62701 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
RPS4XP62701 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RPS4XP62701 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4XP62701 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4XP62701 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.62■□□□□ 0.57
RPS4XP62701 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.62■□□□□ 0.57
RPS4XP62701 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4XP62701 KRT19P1-201ENST00000405746 1186 ntBASIC18.62■□□□□ 0.57
RPS4XP62701 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS4XP62701 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS4XP62701 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.62■□□□□ 0.57
RPS4XP62701 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.62■□□□□ 0.57
RPS4XP62701 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4XP62701 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.62■□□□□ 0.57
RPS4XP62701 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4XP62701 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4XP62701 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS4XP62701 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4XP62701 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RPS4XP62701 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4XP62701 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 AC027702.1-201ENST00000563810 1770 ntBASIC18.61■□□□□ 0.57
RPS4XP62701 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPS4XP62701 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
RPS4XP62701 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPS4XP62701 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.61■□□□□ 0.57
RPS4XP62701 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.61■□□□□ 0.57
RPS4XP62701 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.61■□□□□ 0.57
RPS4XP62701 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS4XP62701 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS4XP62701 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RPS4XP62701 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4XP62701 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RPS4XP62701 PKD1P6-201ENST00000343738 4769 ntBASIC18.61■□□□□ 0.57
RPS4XP62701 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RPS4XP62701 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4XP62701 AC004854.2-201ENST00000608450 1441 ntBASIC18.6■□□□□ 0.57
RPS4XP62701 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.6■□□□□ 0.57
RPS4XP62701 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.6■□□□□ 0.57
RPS4XP62701 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4XP62701 HLA-L-209ENST00000420110 1011 ntBASIC18.6■□□□□ 0.57
RPS4XP62701 KRT18P61-201ENST00000585825 1298 ntBASIC18.6■□□□□ 0.57
RPS4XP62701 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4XP62701 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RPS4XP62701 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4XP62701 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4XP62701 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RPS4XP62701 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.59■□□□□ 0.57
RPS4XP62701 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4XP62701 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4XP62701 SLC25A24-204ENST00000569674 2357 ntBASIC18.59■□□□□ 0.57
RPS4XP62701 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RPS4XP62701 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RPS4XP62701 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4XP62701 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.59■□□□□ 0.57
RPS4XP62701 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4XP62701 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.59■□□□□ 0.57
RPS4XP62701 BID-214ENST00000617586 542 ntTSL 5 BASIC18.59■□□□□ 0.57
RPS4XP62701 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4XP62701 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RPS4XP62701 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4XP62701 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPS4XP62701 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPS4XP62701 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPS4XP62701 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms