Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.24■□□□□ 0.67
RPS3AP61247 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.24■□□□□ 0.67
RPS3AP61247 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPS3AP61247 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.23■□□□□ 0.67
RPS3AP61247 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RPS3AP61247 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS3AP61247 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS3AP61247 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RPS3AP61247 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS3AP61247 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS3AP61247 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RPS3AP61247 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS3AP61247 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.23■□□□□ 0.67
RPS3AP61247 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RPS3AP61247 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPS3AP61247 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.23■□□□□ 0.67
RPS3AP61247 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.23■□□□□ 0.67
RPS3AP61247 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.23■□□□□ 0.67
RPS3AP61247 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPS3AP61247 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS3AP61247 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.23■□□□□ 0.67
RPS3AP61247 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPS3AP61247 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS3AP61247 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.22■□□□□ 0.67
RPS3AP61247 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RPS3AP61247 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RPS3AP61247 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RPS3AP61247 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
RPS3AP61247 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.22■□□□□ 0.67
RPS3AP61247 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.22■□□□□ 0.67
RPS3AP61247 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RPS3AP61247 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS3AP61247 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RPS3AP61247 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RPS3AP61247 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS3AP61247 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS3AP61247 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS3AP61247 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RPS3AP61247 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS3AP61247 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RPS3AP61247 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS3AP61247 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS3AP61247 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS3AP61247 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS3AP61247 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RPS3AP61247 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.21■□□□□ 0.67
RPS3AP61247 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS3AP61247 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.21■□□□□ 0.67
RPS3AP61247 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.21■□□□□ 0.67
RPS3AP61247 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.21■□□□□ 0.67
RPS3AP61247 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RPS3AP61247 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.21■□□□□ 0.67
RPS3AP61247 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RPS3AP61247 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RPS3AP61247 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS3AP61247 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.21■□□□□ 0.67
RPS3AP61247 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RPS3AP61247 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS3AP61247 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS3AP61247 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS3AP61247 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RPS3AP61247 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.2■□□□□ 0.66
RPS3AP61247 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
RPS3AP61247 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.2■□□□□ 0.66
RPS3AP61247 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS3AP61247 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS3AP61247 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPS3AP61247 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPS3AP61247 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS3AP61247 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RPS3AP61247 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS3AP61247 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.2■□□□□ 0.66
RPS3AP61247 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.2■□□□□ 0.66
RPS3AP61247 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPS3AP61247 AC092666.2-201ENST00000613287 246 ntBASIC19.2■□□□□ 0.66
RPS3AP61247 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS3AP61247 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS3AP61247 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS3AP61247 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS3AP61247 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPS3AP61247 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPS3AP61247 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS3AP61247 AC055733.4-201ENST00000638462 1354 ntBASIC19.19■□□□□ 0.66
RPS3AP61247 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms