Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN2P57739 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN2P57739 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.42■□□□□ 0.86
CLDN2P57739 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN2P57739 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.42■□□□□ 0.86
CLDN2P57739 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN2P57739 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.42■□□□□ 0.86
CLDN2P57739 UNC93B5-201ENST00000530315 699 ntBASIC20.42■□□□□ 0.86
CLDN2P57739 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.42■□□□□ 0.86
CLDN2P57739 AC006058.3-201ENST00000606217 1069 ntBASIC20.42■□□□□ 0.86
CLDN2P57739 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.42■□□□□ 0.86
CLDN2P57739 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN2P57739 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN2P57739 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CLDN2P57739 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CLDN2P57739 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.42■□□□□ 0.86
CLDN2P57739 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN2P57739 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN2P57739 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CLDN2P57739 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.41■□□□□ 0.86
CLDN2P57739 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN2P57739 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN2P57739 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN2P57739 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN2P57739 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN2P57739 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN2P57739 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN2P57739 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.41■□□□□ 0.86
CLDN2P57739 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN2P57739 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN2P57739 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.41■□□□□ 0.86
CLDN2P57739 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN2P57739 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN2P57739 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN2P57739 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN2P57739 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN2P57739 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN2P57739 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN2P57739 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.4■□□□□ 0.86
CLDN2P57739 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN2P57739 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN2P57739 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN2P57739 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CLDN2P57739 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.4■□□□□ 0.86
CLDN2P57739 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN2P57739 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN2P57739 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN2P57739 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN2P57739 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.39■□□□□ 0.85
CLDN2P57739 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN2P57739 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN2P57739 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.39■□□□□ 0.85
CLDN2P57739 AC098590.1-201ENST00000468126 897 ntBASIC20.39■□□□□ 0.85
CLDN2P57739 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CLDN2P57739 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.39■□□□□ 0.85
CLDN2P57739 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.39■□□□□ 0.85
CLDN2P57739 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN2P57739 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN2P57739 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CLDN2P57739 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN2P57739 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN2P57739 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN2P57739 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN2P57739 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN2P57739 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
CLDN2P57739 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN2P57739 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN2P57739 AC079834.2-201ENST00000609776 1949 ntBASIC20.39■□□□□ 0.85
CLDN2P57739 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CLDN2P57739 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLDN2P57739 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN2P57739 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLDN2P57739 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN2P57739 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN2P57739 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN2P57739 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN2P57739 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN2P57739 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN2P57739 AC128676.1-201ENST00000454392 318 ntBASIC20.38■□□□□ 0.85
CLDN2P57739 RPS2P52-201ENST00000469610 820 ntBASIC20.38■□□□□ 0.85
CLDN2P57739 AC026366.1-201ENST00000488803 879 ntBASIC20.38■□□□□ 0.85
CLDN2P57739 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN2P57739 AP003097.1-201ENST00000530657 1135 ntBASIC20.38■□□□□ 0.85
CLDN2P57739 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN2P57739 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CLDN2P57739 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN2P57739 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN2P57739 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN2P57739 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN2P57739 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN2P57739 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN2P57739 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN2P57739 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN2P57739 FBXW4P1-201ENST00000426721 2239 ntBASIC20.37■□□□□ 0.85
CLDN2P57739 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN2P57739 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN2P57739 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN2P57739 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN2P57739 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.37■□□□□ 0.85
CLDN2P57739 AC060766.5-201ENST00000590539 871 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms