Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.85■□□□□ 0.93
WNT3AP56704 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.85■□□□□ 0.93
WNT3AP56704 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3AP56704 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3AP56704 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3AP56704 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3AP56704 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
WNT3AP56704 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
WNT3AP56704 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3AP56704 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
WNT3AP56704 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3AP56704 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.84■□□□□ 0.93
WNT3AP56704 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.84■□□□□ 0.93
WNT3AP56704 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.84■□□□□ 0.93
WNT3AP56704 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.84■□□□□ 0.93
WNT3AP56704 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
WNT3AP56704 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3AP56704 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3AP56704 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3AP56704 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3AP56704 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3AP56704 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.84■□□□□ 0.93
WNT3AP56704 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.83■□□□□ 0.93
WNT3AP56704 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
WNT3AP56704 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
WNT3AP56704 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
WNT3AP56704 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.83■□□□□ 0.93
WNT3AP56704 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.83■□□□□ 0.93
WNT3AP56704 AC011767.1-201ENST00000617410 1153 ntBASIC20.83■□□□□ 0.93
WNT3AP56704 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
WNT3AP56704 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.83■□□□□ 0.92
WNT3AP56704 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.83■□□□□ 0.92
WNT3AP56704 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
WNT3AP56704 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
WNT3AP56704 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.83■□□□□ 0.92
WNT3AP56704 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
WNT3AP56704 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.82■□□□□ 0.92
WNT3AP56704 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.82■□□□□ 0.92
WNT3AP56704 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.82■□□□□ 0.92
WNT3AP56704 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.82■□□□□ 0.92
WNT3AP56704 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.82■□□□□ 0.92
WNT3AP56704 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.82■□□□□ 0.92
WNT3AP56704 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
WNT3AP56704 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.82■□□□□ 0.92
WNT3AP56704 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
WNT3AP56704 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 AC007225.1-201ENST00000566331 1836 ntBASIC20.82■□□□□ 0.92
WNT3AP56704 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3AP56704 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.81■□□□□ 0.92
WNT3AP56704 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.81■□□□□ 0.92
WNT3AP56704 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3AP56704 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3AP56704 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3AP56704 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.81■□□□□ 0.92
WNT3AP56704 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.81■□□□□ 0.92
WNT3AP56704 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.81■□□□□ 0.92
WNT3AP56704 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3AP56704 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
WNT3AP56704 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3AP56704 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3AP56704 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3AP56704 AC007322.3-201ENST00000426526 701 ntBASIC20.81■□□□□ 0.92
WNT3AP56704 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.81■□□□□ 0.92
WNT3AP56704 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3AP56704 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.81■□□□□ 0.92
WNT3AP56704 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.81■□□□□ 0.92
WNT3AP56704 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.81■□□□□ 0.92
WNT3AP56704 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.81■□□□□ 0.92
WNT3AP56704 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.81■□□□□ 0.92
WNT3AP56704 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.81■□□□□ 0.92
WNT3AP56704 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3AP56704 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.81■□□□□ 0.92
WNT3AP56704 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3AP56704 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
WNT3AP56704 AC027702.1-201ENST00000563810 1770 ntBASIC20.8■□□□□ 0.92
WNT3AP56704 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
WNT3AP56704 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
WNT3AP56704 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
WNT3AP56704 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.8■□□□□ 0.92
WNT3AP56704 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
WNT3AP56704 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms