Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAV3P56539 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAV3P56539 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.33■□□□□ 0.53
CAV3P56539 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAV3P56539 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.33■□□□□ 0.53
CAV3P56539 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CAV3P56539 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAV3P56539 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.33■□□□□ 0.52
CAV3P56539 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.33■□□□□ 0.52
CAV3P56539 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAV3P56539 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CAV3P56539 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAV3P56539 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.33■□□□□ 0.52
CAV3P56539 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAV3P56539 PBX2P1-201ENST00000493219 1291 ntBASIC18.33■□□□□ 0.52
CAV3P56539 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.33■□□□□ 0.52
CAV3P56539 AC133561.4-201ENST00000566112 224 ntBASIC18.33■□□□□ 0.52
CAV3P56539 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.33■□□□□ 0.52
CAV3P56539 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CAV3P56539 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAV3P56539 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.33■□□□□ 0.52
CAV3P56539 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAV3P56539 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CAV3P56539 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAV3P56539 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.32■□□□□ 0.52
CAV3P56539 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.32■□□□□ 0.52
CAV3P56539 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.32■□□□□ 0.52
CAV3P56539 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.32■□□□□ 0.52
CAV3P56539 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAV3P56539 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CAV3P56539 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAV3P56539 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.32■□□□□ 0.52
CAV3P56539 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAV3P56539 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CAV3P56539 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAV3P56539 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAV3P56539 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAV3P56539 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAV3P56539 OR2I1P-207ENST00000453522 948 ntBASIC18.32■□□□□ 0.52
CAV3P56539 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.32■□□□□ 0.52
CAV3P56539 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.32■□□□□ 0.52
CAV3P56539 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAV3P56539 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAV3P56539 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.32■□□□□ 0.52
CAV3P56539 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.32■□□□□ 0.52
CAV3P56539 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CAV3P56539 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAV3P56539 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAV3P56539 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.31■□□□□ 0.52
CAV3P56539 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.31■□□□□ 0.52
CAV3P56539 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.31■□□□□ 0.52
CAV3P56539 AC007225.1-201ENST00000566331 1836 ntBASIC18.31■□□□□ 0.52
CAV3P56539 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CAV3P56539 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CAV3P56539 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.31■□□□□ 0.52
CAV3P56539 MIR4767-201ENST00000582827 78 ntBASIC18.31■□□□□ 0.52
CAV3P56539 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.31■□□□□ 0.52
CAV3P56539 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.31■□□□□ 0.52
CAV3P56539 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAV3P56539 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.31■□□□□ 0.52
CAV3P56539 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CAV3P56539 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CAV3P56539 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAV3P56539 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAV3P56539 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAV3P56539 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CAV3P56539 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAV3P56539 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAV3P56539 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.3■□□□□ 0.52
CAV3P56539 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAV3P56539 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAV3P56539 AC121338.2-201ENST00000622535 1744 ntBASIC18.3■□□□□ 0.52
CAV3P56539 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAV3P56539 EDA-201ENST00000338901 1233 ntBASIC18.3■□□□□ 0.52
CAV3P56539 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.3■□□□□ 0.52
CAV3P56539 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CAV3P56539 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.3■□□□□ 0.52
CAV3P56539 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.3■□□□□ 0.52
CAV3P56539 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.3■□□□□ 0.52
CAV3P56539 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAV3P56539 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.3■□□□□ 0.52
CAV3P56539 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CAV3P56539 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAV3P56539 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CAV3P56539 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAV3P56539 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.3■□□□□ 0.52
CAV3P56539 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAV3P56539 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAV3P56539 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms