Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF140P52738 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.57■□□□□ 0.88
ZNF140P52738 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF140P52738 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF140P52738 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF140P52738 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ZNF140P52738 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ZNF140P52738 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF140P52738 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF140P52738 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF140P52738 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ZNF140P52738 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF140P52738 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF140P52738 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF140P52738 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF140P52738 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ZNF140P52738 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
ZNF140P52738 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF140P52738 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF140P52738 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
ZNF140P52738 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF140P52738 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF140P52738 AL162412.1-201ENST00000567129 965 ntBASIC20.56■□□□□ 0.88
ZNF140P52738 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF140P52738 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF140P52738 AL591742.1-201ENST00000604433 565 ntBASIC20.56■□□□□ 0.88
ZNF140P52738 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.56■□□□□ 0.88
ZNF140P52738 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.56■□□□□ 0.88
ZNF140P52738 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ZNF140P52738 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF140P52738 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF140P52738 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF140P52738 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF140P52738 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF140P52738 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ZNF140P52738 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ZNF140P52738 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ZNF140P52738 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF140P52738 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF140P52738 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF140P52738 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF140P52738 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF140P52738 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF140P52738 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF140P52738 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF140P52738 CDV3P1-201ENST00000471403 739 ntBASIC20.55■□□□□ 0.88
ZNF140P52738 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF140P52738 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF140P52738 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF140P52738 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF140P52738 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF140P52738 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF140P52738 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF140P52738 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF140P52738 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF140P52738 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF140P52738 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF140P52738 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF140P52738 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZNF140P52738 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF140P52738 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZNF140P52738 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF140P52738 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF140P52738 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ZNF140P52738 FP700111.2-201ENST00000619190 1892 ntBASIC20.54■□□□□ 0.88
ZNF140P52738 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF140P52738 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ZNF140P52738 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ZNF140P52738 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF140P52738 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF140P52738 AC016405.3-201ENST00000607710 860 ntBASIC20.53■□□□□ 0.88
ZNF140P52738 FAM21FP-204ENST00000608637 956 ntBASIC20.53■□□□□ 0.88
ZNF140P52738 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF140P52738 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF140P52738 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ZNF140P52738 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ZNF140P52738 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF140P52738 AC068338.2-201ENST00000563278 1430 ntBASIC20.53■□□□□ 0.88
ZNF140P52738 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF140P52738 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ZNF140P52738 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms