Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.86■■□□□ 1.41
TM4SF4P48230 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.86■■□□□ 1.41
TM4SF4P48230 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.86■■□□□ 1.41
TM4SF4P48230 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TM4SF4P48230 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TM4SF4P48230 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TM4SF4P48230 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
TM4SF4P48230 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.86■■□□□ 1.41
TM4SF4P48230 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.86■■□□□ 1.41
TM4SF4P48230 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.86■■□□□ 1.41
TM4SF4P48230 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TM4SF4P48230 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.86■■□□□ 1.41
TM4SF4P48230 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TM4SF4P48230 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TM4SF4P48230 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TM4SF4P48230 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TM4SF4P48230 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TM4SF4P48230 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TM4SF4P48230 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TM4SF4P48230 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TM4SF4P48230 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TM4SF4P48230 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.85■■□□□ 1.41
TM4SF4P48230 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TM4SF4P48230 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.85■■□□□ 1.41
TM4SF4P48230 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TM4SF4P48230 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TM4SF4P48230 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TM4SF4P48230 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TM4SF4P48230 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TM4SF4P48230 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TM4SF4P48230 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TM4SF4P48230 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.84■■□□□ 1.41
TM4SF4P48230 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.84■■□□□ 1.41
TM4SF4P48230 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.84■■□□□ 1.41
TM4SF4P48230 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TM4SF4P48230 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TM4SF4P48230 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TM4SF4P48230 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.83■■□□□ 1.41
TM4SF4P48230 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.83■■□□□ 1.41
TM4SF4P48230 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.83■■□□□ 1.41
TM4SF4P48230 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.83■■□□□ 1.41
TM4SF4P48230 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TM4SF4P48230 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.83■■□□□ 1.41
TM4SF4P48230 AC087633.2-202ENST00000565166 1439 ntBASIC23.83■■□□□ 1.4
TM4SF4P48230 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.83■■□□□ 1.4
TM4SF4P48230 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TM4SF4P48230 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.82■■□□□ 1.4
TM4SF4P48230 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TM4SF4P48230 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TM4SF4P48230 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TM4SF4P48230 AL390719.1-204ENST00000412397 1219 ntBASIC23.82■■□□□ 1.4
TM4SF4P48230 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.82■■□□□ 1.4
TM4SF4P48230 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.82■■□□□ 1.4
TM4SF4P48230 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.82■■□□□ 1.4
TM4SF4P48230 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.82■■□□□ 1.4
TM4SF4P48230 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TM4SF4P48230 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TM4SF4P48230 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TM4SF4P48230 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TM4SF4P48230 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TM4SF4P48230 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF4P48230 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF4P48230 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF4P48230 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TM4SF4P48230 AC116050.2-201ENST00000612102 1779 ntBASIC23.81■■□□□ 1.4
TM4SF4P48230 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF4P48230 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.81■■□□□ 1.4
TM4SF4P48230 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.81■■□□□ 1.4
TM4SF4P48230 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF4P48230 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
TM4SF4P48230 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.81■■□□□ 1.4
TM4SF4P48230 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF4P48230 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TM4SF4P48230 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TM4SF4P48230 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.81■■□□□ 1.4
TM4SF4P48230 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.81■■□□□ 1.4
TM4SF4P48230 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.81■■□□□ 1.4
TM4SF4P48230 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF4P48230 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.81■■□□□ 1.4
TM4SF4P48230 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.8■■□□□ 1.4
TM4SF4P48230 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF4P48230 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF4P48230 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TM4SF4P48230 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TM4SF4P48230 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.8■■□□□ 1.4
TM4SF4P48230 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF4P48230 AC113347.1-201ENST00000413321 391 ntBASIC23.8■■□□□ 1.4
TM4SF4P48230 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.8■■□□□ 1.4
TM4SF4P48230 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF4P48230 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF4P48230 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.8■■□□□ 1.4
TM4SF4P48230 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF4P48230 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF4P48230 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.8■■□□□ 1.4
TM4SF4P48230 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF4P48230 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.8■■□□□ 1.4
TM4SF4P48230 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.8■■□□□ 1.4
TM4SF4P48230 HTR7P1-201ENST00000538670 1336 ntBASIC23.8■■□□□ 1.4
TM4SF4P48230 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF4P48230 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms