Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 Z99916.2-201ENST00000604037 246 ntBASIC26.33■■□□□ 1.81
COL15A1P39059 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL15A1P39059 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL15A1P39059 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.33■■□□□ 1.81
COL15A1P39059 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL15A1P39059 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL15A1P39059 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.33■■□□□ 1.81
COL15A1P39059 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
COL15A1P39059 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.8
COL15A1P39059 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.8
COL15A1P39059 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
COL15A1P39059 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
COL15A1P39059 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.33■■□□□ 1.8
COL15A1P39059 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL15A1P39059 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL15A1P39059 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.32■■□□□ 1.8
COL15A1P39059 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL15A1P39059 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL15A1P39059 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.32■■□□□ 1.8
COL15A1P39059 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL15A1P39059 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
COL15A1P39059 SNORA78-201ENST00000459373 127 ntBASIC26.32■■□□□ 1.8
COL15A1P39059 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.32■■□□□ 1.8
COL15A1P39059 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
COL15A1P39059 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.31■■□□□ 1.8
COL15A1P39059 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL15A1P39059 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL15A1P39059 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL15A1P39059 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL15A1P39059 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL15A1P39059 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL15A1P39059 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL15A1P39059 POM121L13P-201ENST00000422362 380 ntBASIC26.31■■□□□ 1.8
COL15A1P39059 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
COL15A1P39059 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL15A1P39059 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL15A1P39059 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL15A1P39059 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.3■■□□□ 1.8
COL15A1P39059 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL15A1P39059 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL15A1P39059 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC26.3■■□□□ 1.8
COL15A1P39059 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.3■■□□□ 1.8
COL15A1P39059 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.3■■□□□ 1.8
COL15A1P39059 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.3■■□□□ 1.8
COL15A1P39059 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL15A1P39059 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL15A1P39059 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL15A1P39059 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.3■■□□□ 1.8
COL15A1P39059 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
COL15A1P39059 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL15A1P39059 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL15A1P39059 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL15A1P39059 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.29■■□□□ 1.8
COL15A1P39059 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
COL15A1P39059 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL15A1P39059 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
COL15A1P39059 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.29■■□□□ 1.8
COL15A1P39059 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL15A1P39059 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.29■■□□□ 1.8
COL15A1P39059 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.29■■□□□ 1.8
COL15A1P39059 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.29■■□□□ 1.8
COL15A1P39059 AC073912.3-201ENST00000624414 853 ntBASIC26.29■■□□□ 1.8
COL15A1P39059 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL15A1P39059 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL15A1P39059 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
COL15A1P39059 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL15A1P39059 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL15A1P39059 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
COL15A1P39059 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL15A1P39059 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.28■■□□□ 1.8
COL15A1P39059 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL15A1P39059 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
COL15A1P39059 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.28■■□□□ 1.8
COL15A1P39059 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.28■■□□□ 1.8
COL15A1P39059 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.28■■□□□ 1.8
COL15A1P39059 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL15A1P39059 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL15A1P39059 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL15A1P39059 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL15A1P39059 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.27■■□□□ 1.8
COL15A1P39059 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.27■■□□□ 1.8
COL15A1P39059 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.27■■□□□ 1.8
COL15A1P39059 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.27■■□□□ 1.8
COL15A1P39059 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.27■■□□□ 1.8
COL15A1P39059 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL15A1P39059 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.26■■□□□ 1.79
COL15A1P39059 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL15A1P39059 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL15A1P39059 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms