Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP11P24347 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.58■□□□□ 0.72
MMP11P24347 KRT18P6-201ENST00000555540 1265 ntBASIC19.58■□□□□ 0.72
MMP11P24347 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.58■□□□□ 0.72
MMP11P24347 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.58■□□□□ 0.72
MMP11P24347 AC016405.3-201ENST00000607710 860 ntBASIC19.58■□□□□ 0.72
MMP11P24347 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.58■□□□□ 0.72
MMP11P24347 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.58■□□□□ 0.72
MMP11P24347 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.58■□□□□ 0.72
MMP11P24347 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.58■□□□□ 0.72
MMP11P24347 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP11P24347 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP11P24347 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP11P24347 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP11P24347 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP11P24347 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MMP11P24347 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP11P24347 MIPEPP3-201ENST00000412105 444 ntBASIC19.57■□□□□ 0.72
MMP11P24347 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP11P24347 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP11P24347 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP11P24347 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP11P24347 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
MMP11P24347 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP11P24347 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP11P24347 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP11P24347 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP11P24347 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP11P24347 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
MMP11P24347 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP11P24347 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP11P24347 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP11P24347 AC093787.1-201ENST00000450396 207 ntBASIC19.56■□□□□ 0.72
MMP11P24347 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP11P24347 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.56■□□□□ 0.72
MMP11P24347 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP11P24347 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.56■□□□□ 0.72
MMP11P24347 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
MMP11P24347 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP11P24347 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
MMP11P24347 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP11P24347 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP11P24347 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
MMP11P24347 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP11P24347 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MMP11P24347 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP11P24347 ABHD17AP1-201ENST00000358206 933 ntBASIC19.55■□□□□ 0.72
MMP11P24347 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP11P24347 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
MMP11P24347 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MMP11P24347 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
MMP11P24347 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP11P24347 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.55■□□□□ 0.72
MMP11P24347 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.55■□□□□ 0.72
MMP11P24347 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
MMP11P24347 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MMP11P24347 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.55■□□□□ 0.72
MMP11P24347 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.54■□□□□ 0.72
MMP11P24347 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP11P24347 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP11P24347 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MMP11P24347 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP11P24347 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP11P24347 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP11P24347 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP11P24347 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP11P24347 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
MMP11P24347 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
MMP11P24347 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP11P24347 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP11P24347 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP11P24347 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.54■□□□□ 0.72
MMP11P24347 RARRES2P4-201ENST00000514074 484 ntBASIC19.54■□□□□ 0.72
MMP11P24347 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.54■□□□□ 0.72
MMP11P24347 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.54■□□□□ 0.72
MMP11P24347 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP11P24347 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
MMP11P24347 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP11P24347 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP11P24347 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP11P24347 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MMP11P24347 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.54■□□□□ 0.72
MMP11P24347 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.53■□□□□ 0.72
MMP11P24347 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.53■□□□□ 0.72
MMP11P24347 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
MMP11P24347 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
MMP11P24347 AC245052.3-201ENST00000450182 901 ntBASIC19.53■□□□□ 0.72
MMP11P24347 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.53■□□□□ 0.72
MMP11P24347 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.53■□□□□ 0.72
MMP11P24347 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MMP11P24347 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.53■□□□□ 0.72
MMP11P24347 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.53■□□□□ 0.72
MMP11P24347 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms