Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y1P22090 UBE2DNL-204ENST00000602536 740 ntBASIC18.93■□□□□ 0.62
RPS4Y1P22090 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y1P22090 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.93■□□□□ 0.62
RPS4Y1P22090 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y1P22090 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y1P22090 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y1P22090 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RPS4Y1P22090 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RPS4Y1P22090 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y1P22090 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y1P22090 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y1P22090 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y1P22090 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.92■□□□□ 0.62
RPS4Y1P22090 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.92■□□□□ 0.62
RPS4Y1P22090 NTF6G-201ENST00000591094 616 ntBASIC18.92■□□□□ 0.62
RPS4Y1P22090 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y1P22090 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y1P22090 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y1P22090 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y1P22090 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
RPS4Y1P22090 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y1P22090 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y1P22090 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.92■□□□□ 0.62
RPS4Y1P22090 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPS4Y1P22090 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y1P22090 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y1P22090 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y1P22090 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y1P22090 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.91■□□□□ 0.62
RPS4Y1P22090 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPS4Y1P22090 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y1P22090 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.91■□□□□ 0.62
RPS4Y1P22090 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.91■□□□□ 0.62
RPS4Y1P22090 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.91■□□□□ 0.62
RPS4Y1P22090 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y1P22090 AC087623.3-201ENST00000607047 1098 ntBASIC18.91■□□□□ 0.62
RPS4Y1P22090 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RPS4Y1P22090 MYCNOS-205ENST00000641950 531 ntBASIC18.91■□□□□ 0.62
RPS4Y1P22090 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y1P22090 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y1P22090 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y1P22090 AL121603.2-201ENST00000557373 2117 ntBASIC18.91■□□□□ 0.62
RPS4Y1P22090 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.91■□□□□ 0.62
RPS4Y1P22090 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RPS4Y1P22090 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y1P22090 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RPS4Y1P22090 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y1P22090 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y1P22090 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y1P22090 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
RPS4Y1P22090 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y1P22090 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.9■□□□□ 0.62
RPS4Y1P22090 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RPS4Y1P22090 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y1P22090 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.9■□□□□ 0.62
RPS4Y1P22090 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.9■□□□□ 0.62
RPS4Y1P22090 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y1P22090 MIR2861-201ENST00000636310 90 ntBASIC18.9■□□□□ 0.62
RPS4Y1P22090 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RPS4Y1P22090 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
RPS4Y1P22090 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y1P22090 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
RPS4Y1P22090 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y1P22090 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y1P22090 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y1P22090 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RPS4Y1P22090 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RPS4Y1P22090 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y1P22090 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y1P22090 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y1P22090 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y1P22090 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y1P22090 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y1P22090 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y1P22090 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y1P22090 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RPS4Y1P22090 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y1P22090 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y1P22090 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS4Y1P22090 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS4Y1P22090 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.88■□□□□ 0.61
RPS4Y1P22090 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y1P22090 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y1P22090 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
RPS4Y1P22090 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.88■□□□□ 0.61
RPS4Y1P22090 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RPS4Y1P22090 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms