Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
PDE6GP18545 NFIC-211ENST00000641145 8399 ntBASIC12.8□□□□□ -0.36
PDE6GP18545 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
PDE6GP18545 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6GP18545 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC12.8□□□□□ -0.36
PDE6GP18545 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6GP18545 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6GP18545 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC12.8□□□□□ -0.36
PDE6GP18545 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC12.8□□□□□ -0.36
PDE6GP18545 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
PDE6GP18545 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
PDE6GP18545 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6GP18545 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6GP18545 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
PDE6GP18545 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6GP18545 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
PDE6GP18545 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6GP18545 AC007225.1-201ENST00000566331 1836 ntBASIC12.79□□□□□ -0.36
PDE6GP18545 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
PDE6GP18545 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PDE6GP18545 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6GP18545 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6GP18545 OR7E47P-201ENST00000546390 1422 ntBASIC12.79□□□□□ -0.36
PDE6GP18545 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PDE6GP18545 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 AC026471.1-201ENST00000564629 3026 ntBASIC12.78□□□□□ -0.36
PDE6GP18545 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 DET1-207ENST00000564406 2315 ntTSL 2 BASIC12.78□□□□□ -0.36
PDE6GP18545 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 PLK5-205ENST00000642079 1969 ntBASIC12.78□□□□□ -0.36
PDE6GP18545 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC12.78□□□□□ -0.36
PDE6GP18545 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 AC004687.1-201ENST00000579003 1625 ntBASIC12.78□□□□□ -0.36
PDE6GP18545 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 AC022616.5-201ENST00000518796 181 ntBASIC12.78□□□□□ -0.36
PDE6GP18545 AC079089.2-201ENST00000531211 1277 ntBASIC12.78□□□□□ -0.36
PDE6GP18545 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC12.78□□□□□ -0.36
PDE6GP18545 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PDE6GP18545 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC12.78□□□□□ -0.36
PDE6GP18545 REST-206ENST00000612429 1376 ntTSL 5 BASIC12.78□□□□□ -0.36
PDE6GP18545 REST-207ENST00000616975 1370 ntTSL 5 BASIC12.78□□□□□ -0.36
PDE6GP18545 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC12.78□□□□□ -0.36
PDE6GP18545 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6GP18545 AC079598.2-202ENST00000546624 1451 ntBASIC12.78□□□□□ -0.36
PDE6GP18545 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PDE6GP18545 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PDE6GP18545 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
PDE6GP18545 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
PDE6GP18545 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
PDE6GP18545 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC12.77□□□□□ -0.36
PDE6GP18545 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
PDE6GP18545 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
PDE6GP18545 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
PDE6GP18545 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC12.77□□□□□ -0.37
PDE6GP18545 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PDE6GP18545 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC12.77□□□□□ -0.37
PDE6GP18545 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
PDE6GP18545 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PDE6GP18545 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PDE6GP18545 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC12.77□□□□□ -0.37
PDE6GP18545 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PDE6GP18545 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
PDE6GP18545 AC026471.6-201ENST00000622954 1905 ntBASIC12.77□□□□□ -0.37
PDE6GP18545 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
PDE6GP18545 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PDE6GP18545 AC004408.2-201ENST00000623613 2777 ntBASIC12.77□□□□□ -0.37
PDE6GP18545 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PDE6GP18545 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
PDE6GP18545 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PDE6GP18545 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC12.77□□□□□ -0.37
PDE6GP18545 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PDE6GP18545 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
PDE6GP18545 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC12.77□□□□□ -0.37
PDE6GP18545 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PDE6GP18545 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms