Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRKCAP17252 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRKCAP17252 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRKCAP17252 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.03■□□□□ 0.64
PRKCAP17252 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.03■□□□□ 0.64
PRKCAP17252 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRKCAP17252 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRKCAP17252 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRKCAP17252 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.03■□□□□ 0.64
PRKCAP17252 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRKCAP17252 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRKCAP17252 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRKCAP17252 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRKCAP17252 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRKCAP17252 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRKCAP17252 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.02■□□□□ 0.64
PRKCAP17252 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.02■□□□□ 0.64
PRKCAP17252 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRKCAP17252 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRKCAP17252 FEM1AP4-201ENST00000443167 1987 ntBASIC19.02■□□□□ 0.64
PRKCAP17252 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
PRKCAP17252 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRKCAP17252 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRKCAP17252 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.02■□□□□ 0.63
PRKCAP17252 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PRKCAP17252 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.01■□□□□ 0.63
PRKCAP17252 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 KRT18P20-201ENST00000548986 1279 ntBASIC19.01■□□□□ 0.63
PRKCAP17252 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
PRKCAP17252 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.01■□□□□ 0.63
PRKCAP17252 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.01■□□□□ 0.63
PRKCAP17252 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PRKCAP17252 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCAP17252 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PRKCAP17252 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PRKCAP17252 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRKCAP17252 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRKCAP17252 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRKCAP17252 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCAP17252 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCAP17252 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCAP17252 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19■□□□□ 0.63
PRKCAP17252 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19■□□□□ 0.63
PRKCAP17252 AC120498.10-201ENST00000621827 505 ntBASIC19■□□□□ 0.63
PRKCAP17252 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19■□□□□ 0.63
PRKCAP17252 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCAP17252 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19■□□□□ 0.63
PRKCAP17252 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCAP17252 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19■□□□□ 0.63
PRKCAP17252 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PRKCAP17252 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
PRKCAP17252 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCAP17252 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCAP17252 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCAP17252 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCAP17252 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCAP17252 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PRKCAP17252 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PRKCAP17252 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.99■□□□□ 0.63
PRKCAP17252 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.99■□□□□ 0.63
PRKCAP17252 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.99■□□□□ 0.63
PRKCAP17252 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.99■□□□□ 0.63
PRKCAP17252 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.99■□□□□ 0.63
PRKCAP17252 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 KRT16P2-201ENST00000414673 1423 ntBASIC18.99■□□□□ 0.63
PRKCAP17252 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCAP17252 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCAP17252 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCAP17252 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PRKCAP17252 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCAP17252 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PRKCAP17252 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCAP17252 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PRKCAP17252 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCAP17252 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.98■□□□□ 0.63
PRKCAP17252 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.98■□□□□ 0.63
PRKCAP17252 SLC7A5P2-201ENST00000553010 536 ntBASIC18.98■□□□□ 0.63
PRKCAP17252 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms