Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
MRPL3P09001 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.48■□□□□ 0.55
MRPL3P09001 AC099791.1-201ENST00000416440 715 ntBASIC18.48■□□□□ 0.55
MRPL3P09001 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.48■□□□□ 0.55
MRPL3P09001 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.48■□□□□ 0.55
MRPL3P09001 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.48■□□□□ 0.55
MRPL3P09001 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 BX005040.4-201ENST00000637145 1518 ntBASIC18.48■□□□□ 0.55
MRPL3P09001 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.48■□□□□ 0.55
MRPL3P09001 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL3P09001 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.47■□□□□ 0.55
MRPL3P09001 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL3P09001 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL3P09001 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MRPL3P09001 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL3P09001 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.47■□□□□ 0.55
MRPL3P09001 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.47■□□□□ 0.55
MRPL3P09001 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.47■□□□□ 0.55
MRPL3P09001 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
MRPL3P09001 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.47■□□□□ 0.55
MRPL3P09001 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.47■□□□□ 0.55
MRPL3P09001 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL3P09001 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL3P09001 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.47■□□□□ 0.55
MRPL3P09001 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.47■□□□□ 0.55
MRPL3P09001 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.47■□□□□ 0.55
MRPL3P09001 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.47■□□□□ 0.55
MRPL3P09001 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL3P09001 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL3P09001 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL3P09001 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MRPL3P09001 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.46■□□□□ 0.55
MRPL3P09001 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MRPL3P09001 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MRPL3P09001 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MRPL3P09001 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.46■□□□□ 0.55
MRPL3P09001 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MRPL3P09001 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
MRPL3P09001 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
MRPL3P09001 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MRPL3P09001 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MRPL3P09001 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.46■□□□□ 0.55
MRPL3P09001 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MRPL3P09001 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.46■□□□□ 0.55
MRPL3P09001 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.46■□□□□ 0.55
MRPL3P09001 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.46■□□□□ 0.55
MRPL3P09001 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.46■□□□□ 0.55
MRPL3P09001 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
MRPL3P09001 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MRPL3P09001 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MRPL3P09001 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MRPL3P09001 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.46■□□□□ 0.55
MRPL3P09001 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MRPL3P09001 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL3P09001 AL512408.1-201ENST00000569378 2000 ntBASIC18.45■□□□□ 0.54
MRPL3P09001 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.45■□□□□ 0.54
MRPL3P09001 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
MRPL3P09001 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL3P09001 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.45■□□□□ 0.54
MRPL3P09001 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.45■□□□□ 0.54
MRPL3P09001 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.45■□□□□ 0.54
MRPL3P09001 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.45■□□□□ 0.54
MRPL3P09001 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.45■□□□□ 0.54
MRPL3P09001 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL3P09001 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MRPL3P09001 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL3P09001 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL3P09001 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.45■□□□□ 0.54
MRPL3P09001 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL3P09001 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL3P09001 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL3P09001 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL3P09001 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL3P09001 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL3P09001 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL3P09001 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL3P09001 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
MRPL3P09001 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.44■□□□□ 0.54
MRPL3P09001 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
MRPL3P09001 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.44■□□□□ 0.54
MRPL3P09001 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MRPL3P09001 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MRPL3P09001 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL3P09001 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.44■□□□□ 0.54
MRPL3P09001 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL3P09001 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.44■□□□□ 0.54
MRPL3P09001 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL3P09001 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MRPL3P09001 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL3P09001 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MRPL3P09001 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPL3P09001 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MRPL3P09001 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPL3P09001 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms