Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP2P08253 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP2P08253 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP2P08253 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
MMP2P08253 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.83■□□□□ 0.93
MMP2P08253 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP2P08253 AC092666.2-201ENST00000613287 246 ntBASIC20.83■□□□□ 0.93
MMP2P08253 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
MMP2P08253 AC231657.2-201ENST00000624556 255 ntBASIC20.83■□□□□ 0.93
MMP2P08253 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.83■□□□□ 0.93
MMP2P08253 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.83■□□□□ 0.92
MMP2P08253 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
MMP2P08253 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.83■□□□□ 0.92
MMP2P08253 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
MMP2P08253 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.83■□□□□ 0.92
MMP2P08253 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP2P08253 AC027702.1-201ENST00000563810 1770 ntBASIC20.82■□□□□ 0.92
MMP2P08253 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP2P08253 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
MMP2P08253 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
MMP2P08253 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.82■□□□□ 0.92
MMP2P08253 AL162412.1-201ENST00000567129 965 ntBASIC20.82■□□□□ 0.92
MMP2P08253 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.82■□□□□ 0.92
MMP2P08253 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP2P08253 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP2P08253 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.81■□□□□ 0.92
MMP2P08253 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
MMP2P08253 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
MMP2P08253 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
MMP2P08253 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.81■□□□□ 0.92
MMP2P08253 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP2P08253 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP2P08253 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.81■□□□□ 0.92
MMP2P08253 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
MMP2P08253 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP2P08253 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP2P08253 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP2P08253 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MMP2P08253 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP2P08253 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
MMP2P08253 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP2P08253 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP2P08253 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP2P08253 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.8■□□□□ 0.92
MMP2P08253 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP2P08253 AC007322.1-201ENST00000426983 750 ntBASIC20.8■□□□□ 0.92
MMP2P08253 CDV3P1-201ENST00000471403 739 ntBASIC20.8■□□□□ 0.92
MMP2P08253 FAM21FP-204ENST00000608637 956 ntBASIC20.8■□□□□ 0.92
MMP2P08253 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.8■□□□□ 0.92
MMP2P08253 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP2P08253 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.79■□□□□ 0.92
MMP2P08253 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MMP2P08253 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP2P08253 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP2P08253 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP2P08253 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP2P08253 AC007225.1-201ENST00000566331 1836 ntBASIC20.79■□□□□ 0.92
MMP2P08253 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP2P08253 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.79■□□□□ 0.92
MMP2P08253 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.79■□□□□ 0.92
MMP2P08253 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP2P08253 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP2P08253 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP2P08253 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.78■□□□□ 0.92
MMP2P08253 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.78■□□□□ 0.92
MMP2P08253 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.78■□□□□ 0.92
MMP2P08253 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MMP2P08253 CYP2T1P-201ENST00000432607 1285 ntBASIC20.78■□□□□ 0.92
MMP2P08253 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.78■□□□□ 0.92
MMP2P08253 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.78■□□□□ 0.92
MMP2P08253 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MMP2P08253 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP2P08253 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MMP2P08253 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.78■□□□□ 0.92
MMP2P08253 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MMP2P08253 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MMP2P08253 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms