Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
APOA4P06727 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.65■□□□□ 0.9
APOA4P06727 KRT19P1-201ENST00000405746 1186 ntBASIC20.65■□□□□ 0.9
APOA4P06727 POU5F1P4-201ENST00000413175 1085 ntBASIC20.65■□□□□ 0.9
APOA4P06727 AC010141.2-201ENST00000452426 721 ntBASIC20.65■□□□□ 0.9
APOA4P06727 NTF6G-201ENST00000591094 616 ntBASIC20.65■□□□□ 0.9
APOA4P06727 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.65■□□□□ 0.9
APOA4P06727 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.65■□□□□ 0.9
APOA4P06727 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
APOA4P06727 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOA4P06727 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOA4P06727 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
APOA4P06727 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
APOA4P06727 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
APOA4P06727 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
APOA4P06727 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
APOA4P06727 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
APOA4P06727 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APOA4P06727 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APOA4P06727 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOA4P06727 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOA4P06727 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.64■□□□□ 0.89
APOA4P06727 MIR5787-201ENST00000611784 55 ntBASIC20.64■□□□□ 0.89
APOA4P06727 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
APOA4P06727 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
APOA4P06727 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.64■□□□□ 0.89
APOA4P06727 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOA4P06727 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOA4P06727 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOA4P06727 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
APOA4P06727 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APOA4P06727 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
APOA4P06727 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
APOA4P06727 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOA4P06727 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.63■□□□□ 0.89
APOA4P06727 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOA4P06727 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOA4P06727 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.63■□□□□ 0.89
APOA4P06727 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOA4P06727 MIR935-201ENST00000401179 91 ntBASIC20.63■□□□□ 0.89
APOA4P06727 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.63■□□□□ 0.89
APOA4P06727 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.63■□□□□ 0.89
APOA4P06727 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.63■□□□□ 0.89
APOA4P06727 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
APOA4P06727 AP001160.3-201ENST00000601484 763 ntBASIC20.63■□□□□ 0.89
APOA4P06727 AC120498.10-201ENST00000621827 505 ntBASIC20.63■□□□□ 0.89
APOA4P06727 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
APOA4P06727 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOA4P06727 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
APOA4P06727 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOA4P06727 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOA4P06727 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOA4P06727 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOA4P06727 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOA4P06727 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APOA4P06727 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APOA4P06727 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOA4P06727 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.62■□□□□ 0.89
APOA4P06727 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APOA4P06727 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APOA4P06727 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APOA4P06727 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APOA4P06727 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.62■□□□□ 0.89
APOA4P06727 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APOA4P06727 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APOA4P06727 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APOA4P06727 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.61■□□□□ 0.89
APOA4P06727 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.61■□□□□ 0.89
APOA4P06727 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APOA4P06727 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
APOA4P06727 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
APOA4P06727 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APOA4P06727 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
APOA4P06727 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
APOA4P06727 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APOA4P06727 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.61■□□□□ 0.89
APOA4P06727 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
APOA4P06727 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
APOA4P06727 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APOA4P06727 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.61■□□□□ 0.89
APOA4P06727 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APOA4P06727 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
APOA4P06727 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APOA4P06727 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
APOA4P06727 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
APOA4P06727 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
APOA4P06727 AC061975.6-201ENST00000579045 1553 ntBASIC20.6■□□□□ 0.89
APOA4P06727 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
APOA4P06727 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APOA4P06727 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.6■□□□□ 0.89
APOA4P06727 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APOA4P06727 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
APOA4P06727 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
APOA4P06727 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
APOA4P06727 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.6■□□□□ 0.89
APOA4P06727 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
APOA4P06727 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.6■□□□□ 0.89
APOA4P06727 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
APOA4P06727 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
APOA4P06727 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms