Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.88■□□□□ 0.45
NGFP01138 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NGFP01138 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NGFP01138 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NGFP01138 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NGFP01138 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NGFP01138 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NGFP01138 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NGFP01138 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NGFP01138 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.87■□□□□ 0.45
NGFP01138 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.87■□□□□ 0.45
NGFP01138 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NGFP01138 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
NGFP01138 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.87■□□□□ 0.45
NGFP01138 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NGFP01138 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.86■□□□□ 0.45
NGFP01138 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.86■□□□□ 0.45
NGFP01138 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.86■□□□□ 0.45
NGFP01138 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NGFP01138 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NGFP01138 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NGFP01138 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NGFP01138 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NGFP01138 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
NGFP01138 AC011484.1-201ENST00000377652 1995 ntBASIC17.85■□□□□ 0.45
NGFP01138 CNN2P6-201ENST00000439038 900 ntBASIC17.85■□□□□ 0.45
NGFP01138 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NGFP01138 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.85■□□□□ 0.45
NGFP01138 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.85■□□□□ 0.45
NGFP01138 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NGFP01138 AC080038.1-201ENST00000611274 1154 ntBASIC17.85■□□□□ 0.45
NGFP01138 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NGFP01138 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NGFP01138 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NGFP01138 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NGFP01138 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NGFP01138 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
NGFP01138 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 AC116050.2-201ENST00000612102 1779 ntBASIC17.84■□□□□ 0.45
NGFP01138 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.84■□□□□ 0.45
NGFP01138 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.84■□□□□ 0.45
NGFP01138 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.84■□□□□ 0.45
NGFP01138 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 AC013268.1-206ENST00000638368 961 ntBASIC17.84■□□□□ 0.45
NGFP01138 AC112229.1-201ENST00000639295 961 ntBASIC17.84■□□□□ 0.45
NGFP01138 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.84■□□□□ 0.45
NGFP01138 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.84■□□□□ 0.45
NGFP01138 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.84■□□□□ 0.45
NGFP01138 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NGFP01138 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NGFP01138 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NGFP01138 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NGFP01138 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
NGFP01138 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NGFP01138 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.83■□□□□ 0.44
NGFP01138 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.83■□□□□ 0.44
NGFP01138 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NGFP01138 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.83■□□□□ 0.44
NGFP01138 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.83■□□□□ 0.44
NGFP01138 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NGFP01138 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NGFP01138 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NGFP01138 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NGFP01138 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms