Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SFT2D2O95562 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SFT2D2O95562 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.09■□□□□ 0.33
SFT2D2O95562 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.09■□□□□ 0.33
SFT2D2O95562 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SFT2D2O95562 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SFT2D2O95562 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SFT2D2O95562 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.09■□□□□ 0.33
SFT2D2O95562 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SFT2D2O95562 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SFT2D2O95562 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.09■□□□□ 0.33
SFT2D2O95562 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SFT2D2O95562 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SFT2D2O95562 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
SFT2D2O95562 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SFT2D2O95562 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SFT2D2O95562 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SFT2D2O95562 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SFT2D2O95562 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SFT2D2O95562 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SFT2D2O95562 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SFT2D2O95562 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.08■□□□□ 0.33
SFT2D2O95562 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SFT2D2O95562 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SFT2D2O95562 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SFT2D2O95562 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SFT2D2O95562 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SFT2D2O95562 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SFT2D2O95562 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SFT2D2O95562 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.08■□□□□ 0.32
SFT2D2O95562 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
SFT2D2O95562 AL033527.3-201ENST00000566366 1196 ntBASIC17.08■□□□□ 0.32
SFT2D2O95562 AC012354.3-201ENST00000623734 483 ntBASIC17.08■□□□□ 0.32
SFT2D2O95562 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SFT2D2O95562 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SFT2D2O95562 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SFT2D2O95562 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SFT2D2O95562 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.08■□□□□ 0.32
SFT2D2O95562 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.08■□□□□ 0.32
SFT2D2O95562 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SFT2D2O95562 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SFT2D2O95562 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.07■□□□□ 0.32
SFT2D2O95562 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SFT2D2O95562 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.07■□□□□ 0.32
SFT2D2O95562 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.07■□□□□ 0.32
SFT2D2O95562 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SFT2D2O95562 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.07■□□□□ 0.32
SFT2D2O95562 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SFT2D2O95562 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SFT2D2O95562 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SFT2D2O95562 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SFT2D2O95562 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SFT2D2O95562 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.06■□□□□ 0.32
SFT2D2O95562 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SFT2D2O95562 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.06■□□□□ 0.32
SFT2D2O95562 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SFT2D2O95562 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SFT2D2O95562 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SFT2D2O95562 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SFT2D2O95562 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.06■□□□□ 0.32
SFT2D2O95562 TSPY9P-201ENST00000440215 945 ntBASIC17.06■□□□□ 0.32
SFT2D2O95562 TSPY11P-201ENST00000442607 1045 ntBASIC17.06■□□□□ 0.32
SFT2D2O95562 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SFT2D2O95562 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SFT2D2O95562 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SFT2D2O95562 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.06■□□□□ 0.32
SFT2D2O95562 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.06■□□□□ 0.32
SFT2D2O95562 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SFT2D2O95562 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFT2D2O95562 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFT2D2O95562 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SFT2D2O95562 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFT2D2O95562 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFT2D2O95562 AC092720.2-201ENST00000602388 1665 ntBASIC17.05■□□□□ 0.32
SFT2D2O95562 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFT2D2O95562 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFT2D2O95562 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SFT2D2O95562 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SFT2D2O95562 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFT2D2O95562 MIR6724-1-201ENST00000616420 92 ntBASIC17.05■□□□□ 0.32
SFT2D2O95562 MIR6724-2-201ENST00000616483 92 ntBASIC17.05■□□□□ 0.32
SFT2D2O95562 MIR6724-4-201ENST00000617390 92 ntBASIC17.05■□□□□ 0.32
SFT2D2O95562 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SFT2D2O95562 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.05■□□□□ 0.32
SFT2D2O95562 MIR6724-3-201ENST00000622482 92 ntBASIC17.05■□□□□ 0.32
SFT2D2O95562 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SFT2D2O95562 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SFT2D2O95562 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SFT2D2O95562 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms