Protein–RNA interactions for Protein: O43414

ERI3, ERI1 exoribonuclease 3, humanhuman

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERI3O43414 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
ERI3O43414 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.66■□□□□ 0.74
ERI3O43414 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERI3O43414 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERI3O43414 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERI3O43414 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.65■□□□□ 0.74
ERI3O43414 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ERI3O43414 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.65■□□□□ 0.74
ERI3O43414 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.65■□□□□ 0.74
ERI3O43414 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 AC092666.2-201ENST00000613287 246 ntBASIC19.65■□□□□ 0.74
ERI3O43414 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.65■□□□□ 0.74
ERI3O43414 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.65■□□□□ 0.74
ERI3O43414 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.65■□□□□ 0.74
ERI3O43414 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ERI3O43414 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERI3O43414 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.64■□□□□ 0.74
ERI3O43414 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ERI3O43414 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.64■□□□□ 0.73
ERI3O43414 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERI3O43414 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERI3O43414 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.64■□□□□ 0.73
ERI3O43414 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERI3O43414 AC006128.1-201ENST00000624704 1661 ntBASIC19.64■□□□□ 0.73
ERI3O43414 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERI3O43414 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERI3O43414 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERI3O43414 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERI3O43414 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.64■□□□□ 0.73
ERI3O43414 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERI3O43414 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
ERI3O43414 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ERI3O43414 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.63■□□□□ 0.73
ERI3O43414 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
ERI3O43414 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.63■□□□□ 0.73
ERI3O43414 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 CNN2P6-201ENST00000439038 900 ntBASIC19.63■□□□□ 0.73
ERI3O43414 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.63■□□□□ 0.73
ERI3O43414 AC007322.4-201ENST00000509611 723 ntBASIC19.63■□□□□ 0.73
ERI3O43414 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 AL591742.1-201ENST00000604433 565 ntBASIC19.63■□□□□ 0.73
ERI3O43414 AC080038.1-201ENST00000611274 1154 ntBASIC19.63■□□□□ 0.73
ERI3O43414 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.63■□□□□ 0.73
ERI3O43414 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.63■□□□□ 0.73
ERI3O43414 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERI3O43414 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ERI3O43414 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.62■□□□□ 0.73
ERI3O43414 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
ERI3O43414 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ERI3O43414 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERI3O43414 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.62■□□□□ 0.73
ERI3O43414 AC007322.3-201ENST00000426526 701 ntBASIC19.62■□□□□ 0.73
ERI3O43414 CDV3P1-201ENST00000471403 739 ntBASIC19.62■□□□□ 0.73
ERI3O43414 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.62■□□□□ 0.73
ERI3O43414 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.62■□□□□ 0.73
ERI3O43414 AC231657.2-201ENST00000624556 255 ntBASIC19.62■□□□□ 0.73
ERI3O43414 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERI3O43414 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERI3O43414 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERI3O43414 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ERI3O43414 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ERI3O43414 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERI3O43414 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERI3O43414 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERI3O43414 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERI3O43414 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERI3O43414 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERI3O43414 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERI3O43414 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERI3O43414 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ERI3O43414 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERI3O43414 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ERI3O43414 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERI3O43414 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERI3O43414 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERI3O43414 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms