Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC33.95■■■■□ 3.03
CHD1O14646 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC33.95■■■■□ 3.02
CHD1O14646 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC33.95■■■■□ 3.02
CHD1O14646 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC33.95■■■■□ 3.02
CHD1O14646 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
CHD1O14646 AC003102.1-202ENST00000563394 1796 ntBASIC33.94■■■■□ 3.02
CHD1O14646 C11orf96-202ENST00000528572 1834 ntBASIC33.94■■■■□ 3.02
CHD1O14646 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
CHD1O14646 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC33.94■■■■□ 3.02
CHD1O14646 AC087388.1-201ENST00000571370 1112 ntBASIC33.94■■■■□ 3.02
CHD1O14646 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC33.94■■■■□ 3.02
CHD1O14646 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC33.94■■■■□ 3.02
CHD1O14646 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC33.93■■■■□ 3.02
CHD1O14646 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC33.93■■■■□ 3.02
CHD1O14646 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
CHD1O14646 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC33.93■■■■□ 3.02
CHD1O14646 AC006557.6-201ENST00000623071 864 ntBASIC33.93■■■■□ 3.02
CHD1O14646 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC33.92■■■■□ 3.02
CHD1O14646 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
CHD1O14646 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC33.92■■■■□ 3.02
CHD1O14646 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
CHD1O14646 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC33.92■■■■□ 3.02
CHD1O14646 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC33.92■■■■□ 3.02
CHD1O14646 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC33.92■■■■□ 3.02
CHD1O14646 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
CHD1O14646 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
CHD1O14646 CYP2D8P-201ENST00000433633 1490 ntBASIC33.91■■■■□ 3.02
CHD1O14646 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
CHD1O14646 AC006011.2-201ENST00000621313 1158 ntBASIC33.91■■■■□ 3.02
CHD1O14646 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC33.91■■■■□ 3.02
CHD1O14646 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
CHD1O14646 AC137767.1-201ENST00000602918 1920 ntBASIC33.9■■■■□ 3.02
CHD1O14646 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
CHD1O14646 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
CHD1O14646 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC33.9■■■■□ 3.02
CHD1O14646 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC33.9■■■■□ 3.02
CHD1O14646 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC33.9■■■■□ 3.02
CHD1O14646 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC33.9■■■■□ 3.02
CHD1O14646 CRYGFP-201ENST00000418459 633 ntBASIC33.9■■■■□ 3.02
CHD1O14646 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC33.9■■■■□ 3.02
CHD1O14646 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC33.9■■■■□ 3.02
CHD1O14646 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC33.9■■■■□ 3.02
CHD1O14646 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
CHD1O14646 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
CHD1O14646 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC33.89■■■■□ 3.02
CHD1O14646 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC33.89■■■■□ 3.02
CHD1O14646 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC33.89■■■■□ 3.02
CHD1O14646 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
CHD1O14646 UPK3BP1-201ENST00000428678 509 ntBASIC33.89■■■■□ 3.02
CHD1O14646 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC33.89■■■■□ 3.02
CHD1O14646 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC33.89■■■■□ 3.02
CHD1O14646 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
CHD1O14646 AC010947.1-201ENST00000623454 693 ntBASIC33.89■■■■□ 3.02
CHD1O14646 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC33.89■■■■□ 3.01
CHD1O14646 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC33.88■■■■□ 3.01
CHD1O14646 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
CHD1O14646 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC33.88■■■■□ 3.01
CHD1O14646 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
CHD1O14646 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC33.88■■■■□ 3.01
CHD1O14646 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
CHD1O14646 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
CHD1O14646 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC33.88■■■■□ 3.01
CHD1O14646 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC33.88■■■■□ 3.01
CHD1O14646 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC33.88■■■■□ 3.01
CHD1O14646 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC33.88■■■■□ 3.01
CHD1O14646 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC33.88■■■■□ 3.01
CHD1O14646 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
CHD1O14646 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
CHD1O14646 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
CHD1O14646 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
CHD1O14646 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
CHD1O14646 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC33.87■■■■□ 3.01
CHD1O14646 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CHD1O14646 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC33.87■■■■□ 3.01
CHD1O14646 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC33.87■■■■□ 3.01
CHD1O14646 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC33.87■■■■□ 3.01
CHD1O14646 HTR7P1-201ENST00000538670 1336 ntBASIC33.87■■■■□ 3.01
CHD1O14646 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC33.87■■■■□ 3.01
CHD1O14646 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC33.87■■■■□ 3.01
CHD1O14646 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CHD1O14646 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CHD1O14646 AC104076.2-201ENST00000448912 469 ntBASIC33.87■■■■□ 3.01
CHD1O14646 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CHD1O14646 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
CHD1O14646 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC33.86■■■■□ 3.01
CHD1O14646 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC33.86■■■■□ 3.01
CHD1O14646 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC33.86■■■■□ 3.01
CHD1O14646 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC33.86■■■■□ 3.01
CHD1O14646 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC33.86■■■■□ 3.01
CHD1O14646 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC33.86■■■■□ 3.01
CHD1O14646 TPM4P1-201ENST00000436100 807 ntBASIC33.86■■■■□ 3.01
CHD1O14646 KRT16P5-201ENST00000455284 522 ntBASIC33.86■■■■□ 3.01
CHD1O14646 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC33.86■■■■□ 3.01
CHD1O14646 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC33.86■■■■□ 3.01
CHD1O14646 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
CHD1O14646 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC33.85■■■■□ 3.01
CHD1O14646 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
CHD1O14646 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC33.85■■■■□ 3.01
CHD1O14646 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC33.85■■■■□ 3.01
CHD1O14646 MIR1238-201ENST00000408483 83 ntBASIC33.85■■■■□ 3.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms