Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL162412.1-201ENST00000567129 965 ntBASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NPIPA3F8WFD2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 RARRES2P4-201ENST00000514074 484 ntBASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 RNA5SP413-201ENST00000516373 109 ntBASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA3F8WFD2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 AC010980.2-201ENST00000587099 1412 ntBASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 FAM201B-201ENST00000458407 597 ntBASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 AC092118.2-201ENST00000613495 667 ntBASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA3F8WFD2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPIPA3F8WFD2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.77■□□□□ 0.59
NPIPA3F8WFD2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 AC245052.3-201ENST00000450182 901 ntBASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPA3F8WFD2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPA3F8WFD2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.74■□□□□ 0.59
NPIPA3F8WFD2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms