Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AL109923.1-201ENST00000618799 583 ntBASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 GPX1P1-201ENST00000388829 606 ntBASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 KRT18P20-201ENST00000548986 1279 ntBASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV4S1A1TA0A5B7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AL355802.2-201ENST00000402069 882 ntBASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 NCF1B-203ENST00000435988 1254 ntBASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 DUX4L16-201ENST00000555130 1264 ntBASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC053503.5-201ENST00000601508 636 ntBASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC104771.1-201ENST00000603335 964 ntBASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC005181.1-201ENST00000604782 1256 ntBASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC120498.10-201ENST00000621827 505 ntBASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV4S1A1TA0A5B7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TCRBV4S1A1TA0A5B7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV4S1A1TA0A5B7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV4S1A1TA0A5B7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms